myRT

myRT report for GCA_900516165.1_18174_7_9

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Seq: UKZB01000014.1 Klebsiella pneumoniae strain EuSCAPE_IT273 genome assembly, contig: 18174_79SCcontig000014, whole genome shotgun sequence (102814 bp)
Overview 1 RT 1: 87413-90661 bp Neighborhood of RT #1 [87413, 90675] RVT-GII PRK10276 Feature: gene Location: 87413-87634 bp Feature: gene Location: 87896-88126 bp Feature: gene Location: 88360-89847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88765-89455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88765-89455 bp Feature: gene Location: 89853-90020 bp Feature: gene Location: 90250-90675 bp Feature: domain Description: PRK10276 Location: 90253-90661 bp Feature: domain Description: PRK1 0276 Location: 90253-90661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UKZB01000002.1 Klebsiella pneumoniae strain EuSCAPE_IT273 genome assembly, contig: 18174_79SCcontig000002, whole genome shotgun sequence (765939 bp)
Overview 1 RT 1: 282078-288946 bp Neighborhood of RT #1 [282078, 288948] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 282078-282806 bp Feature: domain Description: FimC Location: 282126-282786 bp Feature: domain Description: FimC Location: 2 82 12 6-2 82 786 bp Feature: gene Location: 282838-285447 bp Feature: domain Description: FimD Location: 282895-285436 bp Feature: domain Description: FimD Location: 2 82 895-2 85436 bp Feature: gene Location: 285447-287525 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 285855-286299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 85855-2 862 99 bp Feature: gene Location: 287582-288022 bp Feature: domain Description: Integrase_1 Location: 287588-287804 bp Feature: domain Description: Integrase_1 Location: 2 87588-2 87804 bp Feature: gene Location: 288283-288948 bp Feature: domain Description: INT_P4_C Location: 288388-288946 bp Feature: domain Description: INT_P4_C Location: 2 88388-2 88946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)