myRT

myRT report for GCA_900516245.1_18174_7_95

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Seq: UKZK01000001.1 Klebsiella pneumoniae strain EuSCAPE_IT364 genome assembly, contig: 18174_795SCcontig000001, whole genome shotgun sequence (771300 bp)
Overview 1 RT 1: 721108-724068 bp Neighborhood of RT #1 [721108, 724079] PRK09678 RVT-UG11 ComFC Feature: gene Location: 721108-721326 bp Ori: SYN38134.1 Feature: domain Description: PRK09678 Location: 721111-721309 bp Feature: domain Description: PRK09678 Location: 721 1 1 1 -721 309 bp Feature: gene Location: 721588-721761 bp Feature: gene Location: 721730-722503 bp Ori: SYN38136.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 721865-722318 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 721 865-72231 8 bp Feature: gene Location: 722938-723495 bp Feature: gene Location: 723498-724079 bp Ori: SYN38138.1 Feature: domain Description: ComFC Location: 723618-724068 bp Feature: domain Description: ComFC Location: 72361 8-724068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, ComFC (COG1040)

Seq: UKZK01000003.1 Klebsiella pneumoniae strain EuSCAPE_IT364 genome assembly, contig: 18174_795SCcontig000003, whole genome shotgun sequence (504973 bp)
Overview 1 RT 1: 370844-378461 bp Neighborhood of RT #1 [370844, 378496] Nuc_deoxyrib_tr RVT-Retrons AAA_15 DUF4917 Feature: gene Location: 370844-371095 bp Feature: gene Location: 371092-371961 bp Ori: SYN40169.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 371614-371785 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 371614-371785 bp Feature: gene Location: 372617-373717 bp Ori: SYN40170.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 372797-373331 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 372 797-373331 bp Feature: gene Location: 373832-376078 bp Ori: SYN40171.1 Feature: domain Description: AAA_15 Location: 373835-374843 bp Feature: domain Description: AAA_15 Location: 373835-374843 bp Feature: gene Location: 377477-378496 bp Ori: SYN40172.1 Feature: domain Description: DUF4917 Location: 377537-378461 bp Feature: domain Description: DUF4917 Location: 377537-378461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175), DUF4917 (pfam16263)

Seq: UKZK01000056.1 Klebsiella pneumoniae strain EuSCAPE_IT364 genome assembly, contig: 18174_795SCcontig000056, whole genome shotgun sequence (2228 bp)
Overview 1 RT 1: 350-1442 bp Neighborhood of RT #1 [350, 1834] RVT-GII Feature: gene Location: 350-1834 bp Ori: SYN47607.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII