myRT

myRT report for GCA_900516275.1_18174_8_10

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Seq: UKZM01000032.1 Klebsiella pneumoniae strain EuSCAPE_HU004 genome assembly, contig: 18174_810SCcontig000032, whole genome shotgun sequence (26610 bp)
Overview 1 RT 1: 9229-14254 bp Neighborhood of RT #1 [9229, 14259] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 9229-10500 bp Feature: domain Description: umuC Location: 9232-10492 bp Feature: domain Description: umuC Location: 9232-1 0492 bp Feature: gene Location: 10500-11183 bp Feature: domain Description: PRK10276 Location: 10803-11166 bp Feature: domain Description: PRK1 0276 Location: 1 0803-1 1 1 66 bp Feature: gene Location: 11337-12824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11742-12432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 742-1 2432 bp Feature: gene Location: 12893-13162 bp Feature: gene Location: 13294-14259 bp Feature: domain Description: ArdC Location: 13420-14254 bp Feature: domain Description: ArdC Location: 1 3420-1 4254 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: UKZM01000038.1 Klebsiella pneumoniae strain EuSCAPE_HU004 genome assembly, contig: 18174_810SCcontig000038, whole genome shotgun sequence (15635 bp)
Overview 1 RT 1: 4720-8014 bp Neighborhood of RT #1 [4720, 8028] RVT-GII PRK10276 Feature: gene Location: 4720-4935 bp Feature: gene Location: 5202-5432 bp Feature: gene Location: 5666-7201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6071-6809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6071-6809 bp Feature: gene Location: 7252-7485 bp Feature: gene Location: 7603-8028 bp Feature: domain Description: PRK10276 Location: 7606-8014 bp Feature: domain Description: PRK102 76 Location: 7606-8014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UKZM01000051.1 Klebsiella pneumoniae strain EuSCAPE_HU004 genome assembly, contig: 18174_810SCcontig000051, whole genome shotgun sequence (3167 bp)
Overview 1 RT 1: 74-2698 bp Neighborhood of RT #1 [74, 2943] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 74-376 bp Feature: domain Description: InsE Location: 83-365 bp Feature: domain Description: InsE Location: 83 -3 65 bp Feature: gene Location: 403-828 bp Feature: domain Description: PHA02517 Location: 427-763 bp Feature: domain Description: PHA02517 Location: 427-763 bp Feature: gene Location: 1420-2943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1693-2425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1693 -2425 bp Feature: domain Description: GIIM Note: maturase Location: 2500-2698 bp Feature: domain Description: GIIM Note: maturase Location: 2500-2698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: UKZM01000013.1 Klebsiella pneumoniae strain EuSCAPE_HU004 genome assembly, contig: 18174_810SCcontig000013, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4 _C Location: 119162-119720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)