myRT

myRT report for GCA_900516335.1_18174_8_109

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Seq: UKZR01000041.1 Klebsiella pneumoniae strain EuSCAPE_ES052 genome assembly, contig: 18174_8109SCcontig000041, whole genome shotgun sequence (17980 bp)
Overview 1 RT 1: 93-1787 bp Neighborhood of RT #1 [93, 1822] RVT-GII PHA02517 InsE Feature: gene Location: 93-488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-486 bp Feature: gene Location: 1080-1514 bp Feature: domain Description: PHA02517 Location: 1182-1449 bp Feature: domain Description: PHA0251 7 Location: 1 1 82-1 449 bp Feature: gene Location: 1511-1822 bp Feature: domain Description: InsE Location: 1514-1787 bp Feature: domain Description: InsE Location: 1 51 4-1 787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: UKZR01000046.1 Klebsiella pneumoniae strain EuSCAPE_ES052 genome assembly, contig: 18174_8109SCcontig000046, whole genome shotgun sequence (15582 bp)
Overview 1 RT 1: 10030-13460 bp Neighborhood of RT #1 [10030, 13460] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 10030-10182 bp Feature: gene Location: 10554-10685 bp Feature: gene Location: 10899-12602 bp Feature: domain Description: RVT_N Location: 10956-11193 bp Feature: domain Description: RVT_N Location: 10956-11193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11244-11880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112 44-11880 bp Feature: domain Description: GIIM Note: maturase Location: 11934-12165 bp Feature: domain Description: GIIM Note: maturase Location: 11934-12 165 bp Feature: domain Description: HNHc Note: nucleases Location: 12399-12555 bp Feature: domain Description: HNHc Note: nucleases Location: 12 399-12 555 bp Feature: gene Location: 12697-12957 bp Feature: gene Location: 13266-13460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: UKZR01000032.1 Klebsiella pneumoniae strain EuSCAPE_ES052 genome assembly, contig: 18174_8109SCcontig000032, whole genome shotgun sequence (38628 bp)
Overview 1 RT 1: 31990-38432 bp Neighborhood of RT #1 [31990, 38449] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31990-32655 bp Feature: domain Description: INT_P4_C Location: 32095-32653 bp Feature: domain Description: INT_P4_C Location: 3 2095-3 2653 bp Feature: gene Location: 32916-33356 bp Feature: domain Description: Integrase_1 Location: 32922-33138 bp Feature: domain Description: Integrase_1 Location: 3 2922-3 3 13 8 bp Feature: gene Location: 33413-35491 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33821-34265 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 3 821-3 4265 bp Feature: gene Location: 35491-38100 bp Feature: domain Description: FimD Location: 35548-38089 bp Feature: domain Description: FimD Location: 3 5548-3 8089 bp Feature: gene Location: 38132-38449 bp Feature: domain Description: FimC Location: 38135-38432 bp Feature: domain Description: FimC Location: 3 813 5-3 843 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: UKZR01000081.1 Klebsiella pneumoniae strain EuSCAPE_ES052 genome assembly, contig: 18174_8109SCcontig000081, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 61-1893 bp Neighborhood of RT #1 [61, 1893] RVT-GII Feature: gene Location: 61-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 66-1156 bp Feature: gene Location: 1702-1893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: UKZR01000090.1 Klebsiella pneumoniae strain EuSCAPE_ES052 genome assembly, contig: 18174_8109SCcontig000090, whole genome shotgun sequence (1383 bp)
Overview 1 RT 1: 61-988 bp Neighborhood of RT #1 [61, 1380] RVT-GII Feature: gene Location: 61-1380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298-988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298-988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII