myRT

myRT report for GCA_900516365.1_18174_8_114

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Seq: UKZV01000015.1 Klebsiella pneumoniae strain EuSCAPE_ES057 genome assembly, contig: 18174_8114SCcontig000015, whole genome shotgun sequence (129624 bp)
Overview 1 RT 1: 31990-38843 bp Neighborhood of RT #1 [31990, 38860] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31990-32655 bp Feature: domain Description: INT_P4_C Location: 32095-32653 bp Feature: domain Description: INT_P4_C Location: 32095-32653 bp Feature: gene Location: 32916-33356 bp Feature: domain Description: Integrase_1 Location: 32922-33138 bp Feature: domain Description: Integrase_1 Location: 32922-331 38 bp Feature: gene Location: 33413-35491 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33821-34265 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33821 -34265 bp Feature: gene Location: 35491-38100 bp Feature: domain Description: FimD Location: 35548-38089 bp Feature: domain Description: FimD Location: 35548-38089 bp Feature: gene Location: 38132-38860 bp Feature: domain Description: FimC Location: 38180-38843 bp Feature: domain Description: FimC Location: 381 80-38843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: UKZV01000054.1 Klebsiella pneumoniae strain EuSCAPE_ES057 genome assembly, contig: 18174_8114SCcontig000054, whole genome shotgun sequence (10109 bp)
Overview 1 RT 1: 1262-5069 bp Neighborhood of RT #1 [1262, 5089] INT_Cre_C RVT-GII HHA Feature: gene Location: 1262-1579 bp Feature: gene Location: 1645-2781 bp Feature: domain Description: INT_Cre_C Location: 2068-2722 bp Feature: domain Description: INT_Cre_C Location: 2 068-2 72 2 bp Feature: gene Location: 2988-4334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3372-3903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3372 -3903 bp Feature: gene Location: 4359-4748 bp Feature: gene Location: 4838-5089 bp Feature: domain Description: HHA Location: 4886-5069 bp Feature: domain Description: HHA Location: 4886-5069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)