myRT

myRT report for GCA_900516405.1_18174_8_123

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Seq: ULAB01000056.1 Klebsiella pneumoniae strain EuSCAPE_ES066 genome assembly, contig: 18174_8123SCcontig000056, whole genome shotgun sequence (1148 bp)
Overview 1 RT 1: 1-766 bp Neighborhood of RT #1 [1, 1146] RVT-GII Feature: gene Location: 1-1146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76-766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76-766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: ULAB01000009.1 Klebsiella pneumoniae strain EuSCAPE_ES066 genome assembly, contig: 18174_8123SCcontig000009, whole genome shotgun sequence (274269 bp)
Overview 1 RT 1: 221511-228379 bp Neighborhood of RT #1 [221511, 228381] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 221511-222239 bp Feature: domain Description: FimC Location: 221544-222222 bp Feature: domain Description: FimC Location: 2 2 1544-2 2 2 2 2 2 bp Feature: gene Location: 222271-224880 bp Feature: domain Description: FimD Location: 222328-224869 bp Feature: domain Description: FimD Location: 2 2 2 32 8-2 2 4869 bp Feature: gene Location: 224880-226958 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 225288-225732 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 2 52 88-2 2 5732 bp Feature: gene Location: 227015-227455 bp Feature: domain Description: Integrase_1 Location: 227021-227237 bp Feature: domain Description: Integrase_1 Location: 2 2 702 1-2 2 72 37 bp Feature: gene Location: 227716-228381 bp Feature: domain Description: INT_P4_C Location: 227821-228379 bp Feature: domain Description: INT_P4_C Location: 2 2 782 1-2 2 8379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: ULAB01000104.1 Klebsiella pneumoniae strain EuSCAPE_ES066 genome assembly, contig: 18174_8123SCcontig000104, whole genome shotgun sequence (481 bp)
Overview 1 RT 1: 2-452 bp Neighborhood of RT #1 [2, 478] RVT-Retrons Feature: gene Location: 2-478 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11-452 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11-452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: ULAB01000017.1 Klebsiella pneumoniae strain EuSCAPE_ES066 genome assembly, contig: 18174_8123SCcontig000017, whole genome shotgun sequence (58507 bp)
Overview 1 RT 1: 49016-52286 bp Neighborhood of RT #1 [49016, 52300] RVT-GII PRK10276 Feature: gene Location: 49016-49231 bp Feature: gene Location: 49498-49728 bp Feature: gene Location: 49962-51473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: gene Location: 51524-51757 bp Feature: gene Location: 51875-52300 bp Feature: domain Description: PRK10276 Location: 51878-52286 bp Feature: domain Description: PRK10276 Location: 51878-52286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)