myRT

myRT report for GCA_900516425.1_18174_8_119

Download annotations/find similar RTs

Seq: ULAI01000050.1 Klebsiella pneumoniae strain EuSCAPE_ES062 genome assembly, contig: 18174_8119SCcontig000050, whole genome shotgun sequence (8992 bp)
Overview 1 RT 1: 89-3237 bp Neighborhood of RT #1 [89, 3302] RVT-GII GIIM PHA02517 Feature: gene Location: 89-220 bp Feature: gene Location: 469-675 bp Feature: gene Location: 762-2285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035-1767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 035-1 767 bp Feature: domain Description: GIIM Note: maturase Location: 1842-2040 bp Feature: domain Description: GIIM Note: maturase Location: 1 842-2040 bp Feature: gene Location: 2239-2664 bp Feature: gene Location: 2877-3302 bp Feature: domain Description: PHA02517 Location: 2901-3237 bp Feature: domain Description: PHA0251 7 Location: 2901 -3237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: ULAI01000015.1 Klebsiella pneumoniae strain EuSCAPE_ES062 genome assembly, contig: 18174_8119SCcontig000015, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 112 900-113563 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 113669-1162 10 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11662 9-117073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 118362 -118578 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4_C Location: 119162 -11972 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: ULAI01000073.1 Klebsiella pneumoniae strain EuSCAPE_ES062 genome assembly, contig: 18174_8119SCcontig000073, whole genome shotgun sequence (1893 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII