myRT

myRT report for GCA_900516445.1_18174_8_13

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Seq: ULAD01000029.1 Klebsiella pneumoniae strain EuSCAPE_HU007 genome assembly, contig: 18174_813SCcontig000029, whole genome shotgun sequence (27819 bp)
Overview 1 RT 1: 10438-15463 bp Neighborhood of RT #1 [10438, 15468] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 10438-11709 bp Feature: domain Description: umuC Location: 10441-11701 bp Feature: domain Description: umuC Location: 1 0441 -1 1 701 bp Feature: gene Location: 11709-12392 bp Feature: domain Description: PRK10276 Location: 12012-12375 bp Feature: domain Description: PRK1 0276 Location: 1 201 2-1 2375 bp Feature: gene Location: 12546-14033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12951-13641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2951 -1 3641 bp Feature: gene Location: 14102-14371 bp Feature: gene Location: 14503-15468 bp Feature: domain Description: ArdC Location: 14629-15463 bp Feature: domain Description: ArdC Location: 1 4629-1 5463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: ULAD01000035.1 Klebsiella pneumoniae strain EuSCAPE_HU007 genome assembly, contig: 18174_813SCcontig000035, whole genome shotgun sequence (15635 bp)
Overview 1 RT 1: 7608-10816 bp Neighborhood of RT #1 [7608, 10816] PRK10276 RVT-GII Feature: gene Location: 7608-8033 bp Feature: domain Description: PRK10276 Location: 7611-8019 bp Feature: domain Description: PRK102 76 Location: 7611-8019 bp Feature: gene Location: 8151-8384 bp Feature: gene Location: 8435-9970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8840-9578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8840-9578 bp Feature: gene Location: 10204-10434 bp Feature: gene Location: 10493-10816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: ULAD01000015.1 Klebsiella pneumoniae strain EuSCAPE_HU007 genome assembly, contig: 18174_813SCcontig000015, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 112900-113 563 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 113 669-116210 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 1183 62-118578 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: ULAD01000043.1 Klebsiella pneumoniae strain EuSCAPE_HU007 genome assembly, contig: 18174_813SCcontig000043, whole genome shotgun sequence (4997 bp)
Overview 1 RT 1: 1612-4979 bp Neighborhood of RT #1 [1612, 4979] Tra5 RVT-GII GIIM Feature: gene Location: 1612-2301 bp Feature: domain Description: Tra5 Location: 1717-2143 bp Feature: domain Description: Tra5 Location: 1717-214 3 bp Feature: gene Location: 2453-2638 bp Feature: gene Location: 2725-4248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2998-3730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2998-3730 bp Feature: domain Description: GIIM Note: maturase Location: 3805-4003 bp Feature: domain Description: GIIM Note: maturase Location: 3805-4 003 bp Feature: gene Location: 4542-4979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388)

Seq: ULAD01000021.1 Klebsiella pneumoniae strain EuSCAPE_HU007 genome assembly, contig: 18174_813SCcontig000021, whole genome shotgun sequence (71431 bp)
Overview 1 RT 1: 42744-45782 bp Neighborhood of RT #1 [42744, 45782] PRK09678 RVT-UG11 SmpB Feature: gene Location: 42744-42962 bp Feature: domain Description: PRK09678 Location: 42747-42945 bp Feature: domain Description: PRK09678 Location: 42747-42945 bp Feature: gene Location: 43209-43397 bp Feature: gene Location: 43366-44139 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 43501-43954 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 435 01-4395 4 bp Feature: gene Location: 44755-45237 bp Feature: domain Description: SmpB Location: 44785-45229 bp Feature: domain Description: SmpB Location: 44785 -45 229 bp Feature: gene Location: 45369-45782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668)