myRT

myRT report for GCA_900516525.1_18174_8_140

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Seq: ULAN01000049.1 Klebsiella pneumoniae strain EuSCAPE_ES083 genome assembly, contig: 18174_8140SCcontig000049, whole genome shotgun sequence (8976 bp)
Overview 1 RT 1: 5347-8888 bp Neighborhood of RT #1 [5347, 8888] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 5347-5619 bp Feature: domain Description: InsE Location: 5356-5605 bp Feature: domain Description: InsE Location: 5356-5605 bp Feature: gene Location: 5675-6100 bp Feature: domain Description: PHA02517 Location: 5699-6035 bp Feature: domain Description: PHA0251 7 Location: 5699-6035 bp Feature: gene Location: 6692-8215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6965-7697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6965-7697 bp Feature: domain Description: GIIM Note: maturase Location: 7772-7970 bp Feature: domain Description: GIIM Note: maturase Location: 7772-7970 bp Feature: gene Location: 8380-8538 bp Feature: domain Description: PHA02517 Location: 8383-8503 bp Feature: domain Description: PHA0251 7 Location: 8383-8503 bp Feature: gene Location: 8757-8888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: ULAN01000017.1 Klebsiella pneumoniae strain EuSCAPE_ES083 genome assembly, contig: 18174_8140SCcontig000017, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 112 900-113563 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 113669-1162 10 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11662 9-117073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 118362 -118578 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4_C Location: 119162 -11972 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: ULAN01000084.1 Klebsiella pneumoniae strain EuSCAPE_ES083 genome assembly, contig: 18174_8140SCcontig000084, whole genome shotgun sequence (1893 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII