myRT

myRT report for GCA_900516665.1_18174_8_16

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Seq: ULBB01000042.1 Klebsiella pneumoniae strain EuSCAPE_HU010 genome assembly, contig: 18174_816SCcontig000042, whole genome shotgun sequence (6548 bp)
Overview 1 RT 1: 3163-5554 bp Neighborhood of RT #1 [3163, 5799] Tra5 RVT-GII GIIM Feature: gene Location: 3163-3852 bp Feature: domain Description: Tra5 Location: 3268-3694 bp Feature: domain Description: Tra5 Location: 3268-3694 bp Feature: gene Location: 4004-4189 bp Feature: gene Location: 4276-5799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4549-5281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4549-5281 bp Feature: domain Description: GIIM Note: maturase Location: 5356-5554 bp Feature: domain Description: GIIM Note: maturase Location: 5356-5554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388)

Seq: ULBB01000035.1 Klebsiella pneumoniae strain EuSCAPE_HU010 genome assembly, contig: 18174_816SCcontig000035, whole genome shotgun sequence (15635 bp)
Overview 1 RT 1: 7608-10816 bp Neighborhood of RT #1 [7608, 10816] PRK10276 RVT-GII Feature: gene Location: 7608-8033 bp Feature: domain Description: PRK10276 Location: 7611-8019 bp Feature: domain Description: PRK102 76 Location: 7611-8019 bp Feature: gene Location: 8151-8384 bp Feature: gene Location: 8435-9970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8840-9578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8840-9578 bp Feature: gene Location: 10204-10434 bp Feature: gene Location: 10493-10816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: ULBB01000013.1 Klebsiella pneumoniae strain EuSCAPE_HU010 genome assembly, contig: 18174_816SCcontig000013, whole genome shotgun sequence (195030 bp)
Overview 1 RT 1: 166343-169381 bp Neighborhood of RT #1 [166343, 169381] PRK09678 RVT-UG11 SmpB Feature: gene Location: 166343-166561 bp Feature: domain Description: PRK09678 Location: 166346-166544 bp Feature: domain Description: PRK09678 Location: 1663 46-166544 bp Feature: gene Location: 166808-166996 bp Feature: gene Location: 167439-167738 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 167442-167553 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 167442-167553 bp Feature: gene Location: 168354-168836 bp Feature: domain Description: SmpB Location: 168384-168828 bp Feature: domain Description: SmpB Location: 1683 84-168828 bp Feature: gene Location: 168968-169381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668)

Seq: ULBB01000015.1 Klebsiella pneumoniae strain EuSCAPE_HU010 genome assembly, contig: 18174_816SCcontig000015, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4 _C Location: 119162-119720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: ULBB01000031.1 Klebsiella pneumoniae strain EuSCAPE_HU010 genome assembly, contig: 18174_816SCcontig000031, whole genome shotgun sequence (26610 bp)
Overview 1 RT 1: 9229-14254 bp Neighborhood of RT #1 [9229, 14259] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 9229-10500 bp Feature: domain Description: umuC Location: 9232-10492 bp Feature: domain Description: umuC Location: 9232-10492 bp Feature: gene Location: 10500-11183 bp Feature: domain Description: PRK10276 Location: 10803-11166 bp Feature: domain Description: PRK10276 Location: 10803-11166 bp Feature: gene Location: 11337-12824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11742-12432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11742-12432 bp Feature: gene Location: 12893-13162 bp Feature: gene Location: 13294-14259 bp Feature: domain Description: ArdC Location: 13420-14254 bp Feature: domain Description: ArdC Location: 13420-1425 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)