myRT

myRT report for GCA_900516695.1_18174_8_162

Download annotations/find similar RTs

Seq: ULBA01000009.1 Klebsiella pneumoniae strain EuSCAPE_ES105 genome assembly, contig: 18174_8162SCcontig000009, whole genome shotgun sequence (274205 bp)
Overview 1 RT 1: 221409-228277 bp Neighborhood of RT #1 [221409, 228279] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 221409-222137 bp Feature: domain Description: FimC Location: 221442-222120 bp Feature: domain Description: FimC Location: 221 442-2221 20 bp Feature: gene Location: 222169-224778 bp Feature: domain Description: FimD Location: 222226-224767 bp Feature: domain Description: FimD Location: 222226-224767 bp Feature: gene Location: 224778-226856 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 225186-225630 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2251 86-225630 bp Feature: gene Location: 226913-227353 bp Feature: domain Description: Integrase_1 Location: 226919-227135 bp Feature: domain Description: Integrase_1 Location: 22691 9-2271 35 bp Feature: gene Location: 227614-228279 bp Feature: domain Description: INT_P4_C Location: 227719-228277 bp Feature: domain Description: INT_P4_C Location: 22771 9-228277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: ULBA01000020.1 Klebsiella pneumoniae strain EuSCAPE_ES105 genome assembly, contig: 18174_8162SCcontig000020, whole genome shotgun sequence (58507 bp)
Overview 1 RT 1: 49016-52286 bp Neighborhood of RT #1 [49016, 52300] RVT-GII PRK10276 Feature: gene Location: 49016-49231 bp Feature: gene Location: 49498-49728 bp Feature: gene Location: 49962-51473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: gene Location: 51524-51757 bp Feature: gene Location: 51875-52300 bp Feature: domain Description: PRK10276 Location: 51878-52286 bp Feature: domain Description: PRK102 76 Location: 51878-52 2 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)