myRT

myRT report for GCA_900516715.1_18174_8_18

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Seq: ULBD01000013.1 Klebsiella pneumoniae strain EuSCAPE_HU012 genome assembly, contig: 18174_818SCcontig000013, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 1 1 2900-1 1 3563 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 1 1 3669-1 1 621 0 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6629-1 1 7073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 1 1 8362-1 1 8578 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4_C Location: 1 1 91 62-1 1 9720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: ULBD01000034.1 Klebsiella pneumoniae strain EuSCAPE_HU012 genome assembly, contig: 18174_818SCcontig000034, whole genome shotgun sequence (7381 bp)
Overview 1 RT 1: 89-3237 bp Neighborhood of RT #1 [89, 3302] RVT-GII GIIM PHA02517 Feature: gene Location: 89-220 bp Feature: gene Location: 469-675 bp Feature: gene Location: 762-2285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035-1767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035-1767 bp Feature: domain Description: GIIM Note: maturase Location: 1842-2040 bp Feature: domain Description: GIIM Note: maturase Location: 1842 -2 040 bp Feature: gene Location: 2239-2664 bp Feature: gene Location: 2877-3302 bp Feature: domain Description: PHA02517 Location: 2901-3237 bp Feature: domain Description: PHA02 517 Location: 2 901-32 37 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: ULBD01000030.1 Klebsiella pneumoniae strain EuSCAPE_HU012 genome assembly, contig: 18174_818SCcontig000030, whole genome shotgun sequence (16855 bp)
Overview 1 RT 1: 2-4499 bp Neighborhood of RT #1 [2, 4504] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 2-745 bp Feature: domain Description: umuC Location: 5-746 bp Feature: domain Description: umuC Location: 5-746 bp Feature: gene Location: 745-1176 bp Feature: domain Description: PRK10276 Location: 796-1159 bp Feature: domain Description: PRK10276 Location: 796-1159 bp Feature: gene Location: 1582-3069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1987-2677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1987-2677 bp Feature: gene Location: 3138-3407 bp Feature: gene Location: 3539-4504 bp Feature: domain Description: ArdC Location: 3665-4499 bp Feature: domain Description: ArdC Location: 3 665-4499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)