myRT

myRT report for GCA_900516725.1_18174_8_17

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Seq: ULBE01000014.1 Klebsiella pneumoniae strain EuSCAPE_HU011 genome assembly, contig: 18174_817SCcontig000014, whole genome shotgun sequence (195030 bp)
Overview 1 RT 1: 166343-169381 bp Neighborhood of RT #1 [166343, 169381] PRK09678 RVT-UG11 SmpB Feature: gene Location: 166343-166561 bp Feature: domain Description: PRK09678 Location: 166346-166544 bp Feature: domain Description: PRK09678 Location: 1 66346-1 66544 bp Feature: gene Location: 166808-166996 bp Feature: gene Location: 167439-167738 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 167442-167553 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 67442-1 67553 bp Feature: gene Location: 168354-168836 bp Feature: domain Description: SmpB Location: 168384-168828 bp Feature: domain Description: SmpB Location: 1 68384-1 68828 bp Feature: gene Location: 168968-169381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668)

Seq: ULBE01000028.1 Klebsiella pneumoniae strain EuSCAPE_HU011 genome assembly, contig: 18174_817SCcontig000028, whole genome shotgun sequence (27819 bp)
Overview 1 RT 1: 12352-17374 bp Neighborhood of RT #1 [12352, 17382] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 12352-13317 bp Feature: domain Description: ArdC Location: 12478-13312 bp Feature: domain Description: ArdC Location: 12 478-13312 bp Feature: gene Location: 13449-13718 bp Feature: gene Location: 13787-15274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14192-14882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14192 -14882 bp Feature: gene Location: 15428-16111 bp Feature: domain Description: PRK10276 Location: 15731-16094 bp Feature: domain Description: PRK102 76 Location: 15731-16094 bp Feature: gene Location: 16111-17382 bp Feature: domain Description: umuC Location: 16114-17374 bp Feature: domain Description: umuC Location: 16114-17374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: ULBE01000033.1 Klebsiella pneumoniae strain EuSCAPE_HU011 genome assembly, contig: 18174_817SCcontig000033, whole genome shotgun sequence (14108 bp)
Overview 1 RT 1: 6081-9289 bp Neighborhood of RT #1 [6081, 9289] PRK10276 RVT-GII Feature: gene Location: 6081-6506 bp Feature: domain Description: PRK10276 Location: 6084-6492 bp Feature: domain Description: PRK10276 Location: 6084-6492 bp Feature: gene Location: 6624-6857 bp Feature: gene Location: 6908-8443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7313-8051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 13 -8051 bp Feature: gene Location: 8677-8907 bp Feature: gene Location: 8966-9289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: ULBE01000042.1 Klebsiella pneumoniae strain EuSCAPE_HU011 genome assembly, contig: 18174_817SCcontig000042, whole genome shotgun sequence (4997 bp)
Overview 1 RT 1: 1612-4979 bp Neighborhood of RT #1 [1612, 4979] Tra5 RVT-GII GIIM Feature: gene Location: 1612-2301 bp Feature: domain Description: Tra5 Location: 1717-2143 bp Feature: domain Description: Tra5 Location: 1717-214 3 bp Feature: gene Location: 2453-2638 bp Feature: gene Location: 2725-4248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2998-3730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2998-3730 bp Feature: domain Description: GIIM Note: maturase Location: 3805-4003 bp Feature: domain Description: GIIM Note: maturase Location: 3805-4 003 bp Feature: gene Location: 4542-4979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388)

Seq: ULBE01000016.1 Klebsiella pneumoniae strain EuSCAPE_HU011 genome assembly, contig: 18174_817SCcontig000016, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 112900-1135 63 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 118362-1185 78 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)