myRT

myRT report for GCA_900516785.1_18174_8_24

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Seq: ULBM01000050.1 Klebsiella pneumoniae strain EuSCAPE_HU018 genome assembly, contig: 18174_824SCcontig000050, whole genome shotgun sequence (2270 bp)
Overview 1 RT 1: 91-2267 bp Neighborhood of RT #1 [91, 2267] RVT-GII GIIM Feature: gene Location: 91-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-1 096 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1369 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 71 -1 369 bp Feature: gene Location: 1908-2267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: ULBM01000016.1 Klebsiella pneumoniae strain EuSCAPE_HU018 genome assembly, contig: 18174_824SCcontig000016, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 112 900-113563 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 113669-1162 10 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11662 9-117073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 118362 -118578 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4_C Location: 119162 -11972 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: ULBM01000014.1 Klebsiella pneumoniae strain EuSCAPE_HU018 genome assembly, contig: 18174_824SCcontig000014, whole genome shotgun sequence (195054 bp)
Overview 1 RT 1: 166367-169405 bp Neighborhood of RT #1 [166367, 169405] PRK09678 RVT-UG11 SmpB Feature: gene Location: 166367-166585 bp Feature: domain Description: PRK09678 Location: 166370-166568 bp Feature: domain Description: PRK09678 Location: 1663 70-166568 bp Feature: gene Location: 166832-167020 bp Feature: gene Location: 167463-167762 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 167466-167577 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 167466-167577 bp Feature: gene Location: 168378-168860 bp Feature: domain Description: SmpB Location: 168408-168852 bp Feature: domain Description: SmpB Location: 168408-168852 bp Feature: gene Location: 168992-169405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668)

Seq: ULBM01000033.1 Klebsiella pneumoniae strain EuSCAPE_HU018 genome assembly, contig: 18174_824SCcontig000033, whole genome shotgun sequence (15635 bp)
Overview 1 RT 1: 7608-10816 bp Neighborhood of RT #1 [7608, 10816] PRK10276 RVT-GII Feature: gene Location: 7608-8033 bp Feature: domain Description: PRK10276 Location: 7611-8019 bp Feature: domain Description: PRK10276 Location: 7611-8019 bp Feature: gene Location: 8151-8384 bp Feature: gene Location: 8435-9970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8840-9578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 884 0-9578 bp Feature: gene Location: 10204-10434 bp Feature: gene Location: 10493-10816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: ULBM01000029.1 Klebsiella pneumoniae strain EuSCAPE_HU018 genome assembly, contig: 18174_824SCcontig000029, whole genome shotgun sequence (27819 bp)
Overview 1 RT 1: 10438-15463 bp Neighborhood of RT #1 [10438, 15468] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 10438-11709 bp Feature: domain Description: umuC Location: 10441-11701 bp Feature: domain Description: umuC Location: 10441-11701 bp Feature: gene Location: 11709-12392 bp Feature: domain Description: PRK10276 Location: 12012-12375 bp Feature: domain Description: PRK10276 Location: 12012-12375 bp Feature: gene Location: 12546-14033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12951-13641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1295 1-13641 bp Feature: gene Location: 14102-14371 bp Feature: gene Location: 14503-15468 bp Feature: domain Description: ArdC Location: 14629-15463 bp Feature: domain Description: ArdC Location: 14629-15 463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)