myRT

myRT report for GCA_900516805.1_18174_8_25

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Seq: ULBO01000017.1 Klebsiella pneumoniae strain EuSCAPE_HU019 genome assembly, contig: 18174_825SCcontig000017, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 1 1 2900-1 1 3563 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 1 1 3669-1 1 621 0 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6629-1 1 7073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 1 1 8362-1 1 8578 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4_C Location: 1 1 91 62-1 1 9720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: ULBO01000056.1 Klebsiella pneumoniae strain EuSCAPE_HU019 genome assembly, contig: 18174_825SCcontig000056, whole genome shotgun sequence (2270 bp)
Overview 1 RT 1: 91-2267 bp Neighborhood of RT #1 [91, 2267] RVT-GII GIIM Feature: gene Location: 91-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-1096 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1369 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1369 bp Feature: gene Location: 1908-2267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: ULBO01000013.1 Klebsiella pneumoniae strain EuSCAPE_HU019 genome assembly, contig: 18174_825SCcontig000013, whole genome shotgun sequence (195030 bp)
Overview 1 RT 1: 166343-169381 bp Neighborhood of RT #1 [166343, 169381] PRK09678 RVT-UG11 SmpB Feature: gene Location: 166343-166561 bp Feature: domain Description: PRK09678 Location: 166346-166544 bp Feature: domain Description: PRK09678 Location: 1663 46-166544 bp Feature: gene Location: 166808-166996 bp Feature: gene Location: 167439-167738 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 167442-167553 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 167442-167553 bp Feature: gene Location: 168354-168836 bp Feature: domain Description: SmpB Location: 168384-168828 bp Feature: domain Description: SmpB Location: 1683 84-168828 bp Feature: gene Location: 168968-169381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668)

Seq: ULBO01000029.1 Klebsiella pneumoniae strain EuSCAPE_HU019 genome assembly, contig: 18174_825SCcontig000029, whole genome shotgun sequence (27819 bp)
Overview 1 RT 1: 10438-15463 bp Neighborhood of RT #1 [10438, 15468] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 10438-11709 bp Feature: domain Description: umuC Location: 10441-11701 bp Feature: domain Description: umuC Location: 104 4 1-11701 bp Feature: gene Location: 11709-12392 bp Feature: domain Description: PRK10276 Location: 12012-12375 bp Feature: domain Description: PRK10276 Location: 12012-12375 bp Feature: gene Location: 12546-14033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12951-13641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12951-1364 1 bp Feature: gene Location: 14102-14371 bp Feature: gene Location: 14503-15468 bp Feature: domain Description: ArdC Location: 14629-15463 bp Feature: domain Description: ArdC Location: 14 629-154 63 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: ULBO01000035.1 Klebsiella pneumoniae strain EuSCAPE_HU019 genome assembly, contig: 18174_825SCcontig000035, whole genome shotgun sequence (15635 bp)
Overview 1 RT 1: 7608-10816 bp Neighborhood of RT #1 [7608, 10816] PRK10276 RVT-GII Feature: gene Location: 7608-8033 bp Feature: domain Description: PRK10276 Location: 7611-8019 bp Feature: domain Description: PRK10276 Location: 7611-8019 bp Feature: gene Location: 8151-8384 bp Feature: gene Location: 8435-9970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8840-9578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8840-95 78 bp Feature: gene Location: 10204-10434 bp Feature: gene Location: 10493-10816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII