myRT

myRT report for GCA_900516855.1_18174_8_30

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Seq: ULBR01000040.1 Klebsiella pneumoniae strain EuSCAPE_HU024 genome assembly, contig: 18174_830SCcontig000040, whole genome shotgun sequence (28629 bp)
Overview 1 RT 1: 2-3017 bp Neighborhood of RT #1 [2, 3022] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 2-160 bp Feature: domain Description: PRK09678 Location: 11-143 bp Feature: domain Description: PRK09678 Location: 1 1 -1 43 bp Feature: gene Location: 407-595 bp Feature: gene Location: 1038-1337 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1041-1152 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 041 -1 1 52 bp Feature: gene Location: 1953-2435 bp Feature: domain Description: SmpB Location: 1983-2427 bp Feature: domain Description: SmpB Location: 1 983-2427 bp Feature: gene Location: 2546-3022 bp Feature: domain Description: PRK10724 Location: 2552-3017 bp Feature: domain Description: PRK1 0724 Location: 2552-301 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: ULBR01000078.1 Klebsiella pneumoniae strain EuSCAPE_HU024 genome assembly, contig: 18174_830SCcontig000078, whole genome shotgun sequence (1804 bp)
Overview 1 RT 1: 2-1354 bp Neighborhood of RT #1 [2, 1746] RVT-GII Feature: gene Location: 2-262 bp Feature: gene Location: 337-1746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 664-1354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 664-1354 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: ULBR01000059.1 Klebsiella pneumoniae strain EuSCAPE_HU024 genome assembly, contig: 18174_830SCcontig000059, whole genome shotgun sequence (9035 bp)
Overview 1 RT 1: 772-4865 bp Neighborhood of RT #1 [772, 4930] COG3547 RVT-GII GIIM PHA02517 Feature: gene Location: 772-1848 bp Feature: domain Description: COG3547 Location: 811-1732 bp Feature: domain Description: COG3 547 Location: 811-173 2 bp Feature: gene Location: 2097-2303 bp Feature: gene Location: 2390-3913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2663-3395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2663 -3 3 95 bp Feature: domain Description: GIIM Note: maturase Location: 3470-3668 bp Feature: domain Description: GIIM Note: maturase Location: 3 470-3 668 bp Feature: gene Location: 3867-4292 bp Feature: gene Location: 4505-4930 bp Feature: domain Description: PHA02517 Location: 4529-4865 bp Feature: domain Description: PHA02517 Location: 4529-4865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)