myRT

myRT report for GCA_900516925.1_18174_8_34

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Seq: ULBZ01000035.1 Klebsiella pneumoniae strain EuSCAPE_HU028 genome assembly, contig: 18174_834SCcontig000035, whole genome shotgun sequence (5414 bp)
Overview 1 RT 1: 2029-5396 bp Neighborhood of RT #1 [2029, 5396] Tra5 RVT-GII GIIM Feature: gene Location: 2029-2718 bp Feature: domain Description: Tra5 Location: 2134-2560 bp Feature: domain Description: Tra5 Location: 21 34-2560 bp Feature: gene Location: 2870-3055 bp Feature: gene Location: 3142-4665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3415-4147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341 5-41 47 bp Feature: domain Description: GIIM Note: maturase Location: 4222-4420 bp Feature: domain Description: GIIM Note: maturase Location: 4222-4420 bp Feature: gene Location: 4959-5396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388)

Seq: ULBZ01000016.1 Klebsiella pneumoniae strain EuSCAPE_HU028 genome assembly, contig: 18174_834SCcontig000016, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 112 900-113563 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 113669-1162 10 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11662 9-117073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 118362 -118578 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4_C Location: 119162 -11972 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: ULBZ01000014.1 Klebsiella pneumoniae strain EuSCAPE_HU028 genome assembly, contig: 18174_834SCcontig000014, whole genome shotgun sequence (195030 bp)
Overview 1 RT 1: 166343-169381 bp Neighborhood of RT #1 [166343, 169381] PRK09678 RVT-UG11 SmpB Feature: gene Location: 166343-166561 bp Feature: domain Description: PRK09678 Location: 166346-166544 bp Feature: domain Description: PRK09678 Location: 1663 46-166544 bp Feature: gene Location: 166808-166996 bp Feature: gene Location: 167439-167738 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 167442-167553 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 167442-167553 bp Feature: gene Location: 168354-168836 bp Feature: domain Description: SmpB Location: 168384-168828 bp Feature: domain Description: SmpB Location: 1683 84-168828 bp Feature: gene Location: 168968-169381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668)

Seq: ULBZ01000023.1 Klebsiella pneumoniae strain EuSCAPE_HU028 genome assembly, contig: 18174_834SCcontig000023, whole genome shotgun sequence (70823 bp)
Overview 1 RT 1: 61435-64729 bp Neighborhood of RT #1 [61435, 64743] RVT-GII PRK10276 Feature: gene Location: 61435-61650 bp Feature: gene Location: 61917-62147 bp Feature: gene Location: 62381-63916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62786-63524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62786-63524 bp Feature: gene Location: 63967-64200 bp Feature: gene Location: 64318-64743 bp Feature: domain Description: PRK10276 Location: 64321-64729 bp Feature: domain Description: PRK10276 Location: 64 321-64 729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)