myRT

myRT report for GCA_900516935.1_18174_8_42

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Seq: ULCC01000040.1 Klebsiella pneumoniae strain EuSCAPE_HU036 genome assembly, contig: 18174_842SCcontig000040, whole genome shotgun sequence (15635 bp)
Overview 1 RT 1: 7608-10816 bp Neighborhood of RT #1 [7608, 10816] PRK10276 RVT-GII Feature: gene Location: 7608-8033 bp Feature: domain Description: PRK10276 Location: 7611-8019 bp Feature: domain Description: PRK1 0276 Location: 761 1 -801 9 bp Feature: gene Location: 8151-8384 bp Feature: gene Location: 8435-9970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8840-9578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8840-9578 bp Feature: gene Location: 10204-10434 bp Feature: gene Location: 10493-10816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: ULCC01000017.1 Klebsiella pneumoniae strain EuSCAPE_HU036 genome assembly, contig: 18174_842SCcontig000017, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 112 900-113563 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 113669-1162 10 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11662 9-117073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 118362 -118578 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4_C Location: 119162 -11972 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: ULCC01000055.1 Klebsiella pneumoniae strain EuSCAPE_HU036 genome assembly, contig: 18174_842SCcontig000055, whole genome shotgun sequence (3108 bp)
Overview 1 RT 1: 2-2628 bp Neighborhood of RT #1 [2, 2873] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 2-277 bp Feature: domain Description: InsE Location: 11-263 bp Feature: domain Description: InsE Location: 11-263 bp Feature: gene Location: 300-758 bp Feature: domain Description: PHA02517 Location: 357-693 bp Feature: domain Description: PHA02517 Location: 3 57-693 bp Feature: gene Location: 1350-2873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1623-2355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1623 -23 55 bp Feature: domain Description: GIIM Note: maturase Location: 2430-2628 bp Feature: domain Description: GIIM Note: maturase Location: 243 0-2628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: ULCC01000035.1 Klebsiella pneumoniae strain EuSCAPE_HU036 genome assembly, contig: 18174_842SCcontig000035, whole genome shotgun sequence (27819 bp)
Overview 1 RT 1: 10438-15463 bp Neighborhood of RT #1 [10438, 15468] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 10438-11709 bp Feature: domain Description: umuC Location: 10441-11701 bp Feature: domain Description: umuC Location: 104 4 1-11701 bp Feature: gene Location: 11709-12392 bp Feature: domain Description: PRK10276 Location: 12012-12375 bp Feature: domain Description: PRK10276 Location: 12012-12375 bp Feature: gene Location: 12546-14033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12951-13641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12951-1364 1 bp Feature: gene Location: 14102-14371 bp Feature: gene Location: 14503-15468 bp Feature: domain Description: ArdC Location: 14629-15463 bp Feature: domain Description: ArdC Location: 14 629-154 63 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)