myRT

myRT report for GCA_900516965.1_18174_8_50

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Seq: ULCE01000043.1 Klebsiella pneumoniae strain EuSCAPE_HU044 genome assembly, contig: 18174_850SCcontig000043, whole genome shotgun sequence (5414 bp)
Overview 1 RT 1: 750-3228 bp Neighborhood of RT #1 [750, 3386] RVT-GII GIIM Tra5 Feature: gene Location: 750-2273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1023-1755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 023-1 755 bp Feature: domain Description: GIIM Note: maturase Location: 1830-2028 bp Feature: domain Description: GIIM Note: maturase Location: 1 830-2028 bp Feature: gene Location: 2360-2545 bp Feature: gene Location: 2697-3386 bp Feature: domain Description: Tra5 Location: 2802-3228 bp Feature: domain Description: Tra5 Location: 2802-3228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: ULCE01000031.1 Klebsiella pneumoniae strain EuSCAPE_HU044 genome assembly, contig: 18174_850SCcontig000031, whole genome shotgun sequence (24007 bp)
Overview 1 RT 1: 9229-14254 bp Neighborhood of RT #1 [9229, 14259] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 9229-10500 bp Feature: domain Description: umuC Location: 9232-10492 bp Feature: domain Description: umuC Location: 92 32 -10492 bp Feature: gene Location: 10500-11183 bp Feature: domain Description: PRK10276 Location: 10803-11166 bp Feature: domain Description: PRK102 76 Location: 10803-11166 bp Feature: gene Location: 11337-12824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11742-12432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11742 -12 432 bp Feature: gene Location: 12893-13162 bp Feature: gene Location: 13294-14259 bp Feature: domain Description: ArdC Location: 13420-14254 bp Feature: domain Description: ArdC Location: 1342 0-142 54 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: ULCE01000014.1 Klebsiella pneumoniae strain EuSCAPE_HU044 genome assembly, contig: 18174_850SCcontig000014, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 112900-113 563 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 113 669-116210 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 1183 62-118578 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: ULCE01000035.1 Klebsiella pneumoniae strain EuSCAPE_HU044 genome assembly, contig: 18174_850SCcontig000035, whole genome shotgun sequence (15635 bp)
Overview 1 RT 1: 7608-10816 bp Neighborhood of RT #1 [7608, 10816] PRK10276 RVT-GII Feature: gene Location: 7608-8033 bp Feature: domain Description: PRK10276 Location: 7611-8019 bp Feature: domain Description: PRK10276 Location: 7611-8019 bp Feature: gene Location: 8151-8384 bp Feature: gene Location: 8435-9970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8840-9578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 884 0-9578 bp Feature: gene Location: 10204-10434 bp Feature: gene Location: 10493-10816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII