myRT

myRT report for GCA_900517045.1_18174_8_58

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Seq: ULCM01000019.1 Klebsiella pneumoniae strain EuSCAPE_HU053 genome assembly, contig: 18174_858SCcontig000019, whole genome shotgun sequence (45627 bp)
Overview 1 RT 1: 4833-10766 bp Neighborhood of RT #1 [4833, 10774] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 4833-5264 bp Feature: gene Location: 5744-6709 bp Ori: SYR72737.1 Gene: traC Feature: domain Description: ArdC Location: 5870-6704 bp Feature: domain Description: ArdC Location: 5870-6704 bp Feature: gene Location: 7179-8666 bp Ori: SYR72738.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7584-8274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7584-8274 bp Feature: gene Location: 9072-9503 bp Ori: SYR72739.1 Gene: umuD_3 Feature: domain Description: PRK10276 Location: 9123-9486 bp Feature: domain Description: PRK1 0276 Location: 91 23-9486 bp Feature: gene Location: 9503-10774 bp Ori: SYR72740.1 Gene: umuC_3 Feature: domain Description: umuC Location: 9506-10766 bp Feature: domain Description: umuC Location: 9506-1 0766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: ULCM01000008.1 Klebsiella pneumoniae strain EuSCAPE_HU053 genome assembly, contig: 18174_858SCcontig000008, whole genome shotgun sequence (192524 bp)
Overview 1 RT 1: 34739-37796 bp Neighborhood of RT #1 [34739, 37798] RVT-Retrons DinI Feature: gene Location: 34739-34933 bp Feature: gene Location: 35073-35432 bp Feature: gene Location: 35502-36221 bp Ori: SYR70496.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35508-35994 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35508-35994 bp Feature: gene Location: 36774-36929 bp Feature: gene Location: 37358-37798 bp Ori: SYR70498.1 Gene: dinI_4 Feature: domain Description: DinI Location: 37613-37796 bp Feature: domain Description: DinI Location: 37613-37796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DinI (pfam06183)

Seq: ULCM01000003.1 Klebsiella pneumoniae strain EuSCAPE_HU053 genome assembly, contig: 18174_858SCcontig000003, whole genome shotgun sequence (611002 bp)
Overview 1 RT 1: 219147-224451 bp Neighborhood of RT #1 [219147, 224453] PRK10276 umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 219147-219566 bp Ori: SYR67025.1 Gene: umuD_2 Feature: domain Description: PRK10276 Location: 219150-219561 bp Feature: domain Description: PRK10276 Location: 219150-219561 bp Feature: gene Location: 219568-220833 bp Ori: SYR67026.1 Gene: umuC_2 Feature: domain Description: umuC Location: 219571-220831 bp Feature: domain Description: umuC Location: 219571-22083 1 bp Feature: gene Location: 221506-222414 bp Ori: SYR67027.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 221779-222235 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 221779-22223 5 bp Feature: gene Location: 222615-223283 bp Ori: SYR67231.1 Gene: yedK_1 Feature: domain Description: PRK09951 Location: 222618-223281 bp Feature: domain Description: PRK09951 Location: 222618-223 281 bp Feature: gene Location: 223488-224453 bp Ori: SYR67233.1 Gene: sapB_2 Feature: domain Description: PRK15110 Location: 223491-224451 bp Feature: domain Description: PRK15110 Location: 223 491-224451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: ULCM01000026.1 Klebsiella pneumoniae strain EuSCAPE_HU053 genome assembly, contig: 18174_858SCcontig000026, whole genome shotgun sequence (8678 bp)
Overview 1 RT 1: 3667-8038 bp Neighborhood of RT #1 [3667, 8154] InsE PHA02517 RVT-GII GIIM COG3547 Feature: gene Location: 3667-3969 bp Ori: SYR72982.1 Feature: domain Description: InsE Location: 3676-3958 bp Feature: domain Description: InsE Location: 3676-3958 bp Feature: gene Location: 4182-4421 bp Ori: SYR72983.1 Feature: domain Description: PHA02517 Location: 4185-4356 bp Feature: domain Description: PHA02517 Location: 4 185-4 356 bp Feature: gene Location: 5013-6536 bp Ori: SYR72984.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5286-6018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5286-6018 bp Feature: domain Description: GIIM Note: maturase Location: 6093-6291 bp Feature: domain Description: GIIM Note: maturase Location: 6093-6291 bp Feature: gene Location: 7078-8154 bp Ori: SYR72985.1 Feature: domain Description: COG3547 Location: 7117-8038 bp Feature: domain Description: COG354 7 Location: 7117-8038 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )