myRT

myRT report for GCA_900517085.1_18174_8_8

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Seq: ULCP01000040.1 Klebsiella pneumoniae strain EuSCAPE_HU002 genome assembly, contig: 18174_88SCcontig000040, whole genome shotgun sequence (14108 bp)
Overview 1 RT 1: 6081-9289 bp Neighborhood of RT #1 [6081, 9289] PRK10276 RVT-GII Feature: gene Location: 6081-6506 bp Feature: domain Description: PRK10276 Location: 6084-6492 bp Feature: domain Description: PRK1 0276 Location: 6084-6492 bp Feature: gene Location: 6624-6857 bp Feature: gene Location: 6908-8443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7313-8051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 731 3-8051 bp Feature: gene Location: 8677-8907 bp Feature: gene Location: 8966-9289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: ULCP01000015.1 Klebsiella pneumoniae strain EuSCAPE_HU002 genome assembly, contig: 18174_88SCcontig000015, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 112 900-113563 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 113669-1162 10 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11662 9-117073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 118362 -118578 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4_C Location: 119162 -11972 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: ULCP01000034.1 Klebsiella pneumoniae strain EuSCAPE_HU002 genome assembly, contig: 18174_88SCcontig000034, whole genome shotgun sequence (27819 bp)
Overview 1 RT 1: 10438-15463 bp Neighborhood of RT #1 [10438, 15468] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 10438-11709 bp Feature: domain Description: umuC Location: 10441-11701 bp Feature: domain Description: umuC Location: 10441-11701 bp Feature: gene Location: 11709-12392 bp Feature: domain Description: PRK10276 Location: 12012-12375 bp Feature: domain Description: PRK10276 Location: 12012-123 75 bp Feature: gene Location: 12546-14033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12951-13641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12951-13 641 bp Feature: gene Location: 14102-14371 bp Feature: gene Location: 14503-15468 bp Feature: domain Description: ArdC Location: 14629-15463 bp Feature: domain Description: ArdC Location: 14629-15463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: ULCP01000046.1 Klebsiella pneumoniae strain EuSCAPE_HU002 genome assembly, contig: 18174_88SCcontig000046, whole genome shotgun sequence (5414 bp)
Overview 1 RT 1: 2029-5396 bp Neighborhood of RT #1 [2029, 5396] Tra5 RVT-GII GIIM Feature: gene Location: 2029-2718 bp Feature: domain Description: Tra5 Location: 2134-2560 bp Feature: domain Description: Tra5 Location: 2134 -2560 bp Feature: gene Location: 2870-3055 bp Feature: gene Location: 3142-4665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3415-4147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 15-4 14 7 bp Feature: domain Description: GIIM Note: maturase Location: 4222-4420 bp Feature: domain Description: GIIM Note: maturase Location: 4 222-4 4 20 bp Feature: gene Location: 4959-5396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388)