myRT

myRT report for GCA_900517125.1_18489_5_10

Download annotations/find similar RTs

Seq: ULCV01000019.1 Klebsiella pneumoniae strain EuSCAPE_ES270 genome assembly, contig: 18489_510SCcontig000019, whole genome shotgun sequence (103378 bp)
Overview 1 RT 1: 64519-71387 bp Neighborhood of RT #1 [64519, 71389] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 64519-65247 bp Feature: domain Description: FimC Location: 64567-65230 bp Feature: domain Description: FimC Location: 64567-65230 bp Feature: gene Location: 65279-67888 bp Feature: domain Description: FimD Location: 65336-67877 bp Feature: domain Description: FimD Location: 65336-67877 bp Feature: gene Location: 67888-69966 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 68296-68740 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 68296-68740 bp Feature: gene Location: 70023-70463 bp Feature: domain Description: Integrase_1 Location: 70029-70245 bp Feature: domain Description: Integrase_1 Location: 70029-70245 bp Feature: gene Location: 70724-71389 bp Feature: domain Description: INT_P4_C Location: 70829-71387 bp Feature: domain Description: INT_P4_C Location: 70829-71 387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: ULCV01000040.1 Klebsiella pneumoniae strain EuSCAPE_ES270 genome assembly, contig: 18489_510SCcontig000040, whole genome shotgun sequence (23833 bp)
Overview 1 RT 1: 20054-23225 bp Neighborhood of RT #1 [20054, 23227] PRK10276 RVT-GII DDE_Tnp_IS1 Feature: gene Location: 20054-20737 bp Feature: domain Description: PRK10276 Location: 20357-20720 bp Feature: domain Description: PRK102 76 Location: 2 0357-2 072 0 bp Feature: gene Location: 20791-21393 bp Feature: gene Location: 21368-22378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21374-21986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1374-2 1986 bp Feature: gene Location: 22501-22713 bp Feature: gene Location: 22724-23227 bp Feature: domain Description: DDE_Tnp_IS1 Location: 22835-23225 bp Feature: domain Description: DDE_Tnp_IS1 Location: 2 2 835-2 32 2 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DDE_Tnp_IS1 (pfam03400)