myRT

myRT report for GCA_900517135.1_18174_8_9

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Seq: ULCS01000035.1 Klebsiella pneumoniae strain EuSCAPE_HU003 genome assembly, contig: 18174_89SCcontig000035, whole genome shotgun sequence (14108 bp)
Overview 1 RT 1: 6081-9289 bp Neighborhood of RT #1 [6081, 9289] PRK10276 RVT-GII Feature: gene Location: 6081-6506 bp Feature: domain Description: PRK10276 Location: 6084-6492 bp Feature: domain Description: PRK1 0276 Location: 6084-6492 bp Feature: gene Location: 6624-6857 bp Feature: gene Location: 6908-8443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7313-8051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 731 3-8051 bp Feature: gene Location: 8677-8907 bp Feature: gene Location: 8966-9289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: ULCS01000032.1 Klebsiella pneumoniae strain EuSCAPE_HU003 genome assembly, contig: 18174_89SCcontig000032, whole genome shotgun sequence (25213 bp)
Overview 1 RT 1: 10438-15463 bp Neighborhood of RT #1 [10438, 15468] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 10438-11709 bp Feature: domain Description: umuC Location: 10441-11701 bp Feature: domain Description: umuC Location: 10441-11701 bp Feature: gene Location: 11709-12392 bp Feature: domain Description: PRK10276 Location: 12012-12375 bp Feature: domain Description: PRK102 76 Location: 12 012 -12 375 bp Feature: gene Location: 12546-14033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12951-13641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 951-13641 bp Feature: gene Location: 14102-14371 bp Feature: gene Location: 14503-15468 bp Feature: domain Description: ArdC Location: 14629-15463 bp Feature: domain Description: ArdC Location: 1462 9-15463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: ULCS01000046.1 Klebsiella pneumoniae strain EuSCAPE_HU003 genome assembly, contig: 18174_89SCcontig000046, whole genome shotgun sequence (3167 bp)
Overview 1 RT 1: 74-2698 bp Neighborhood of RT #1 [74, 2943] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 74-376 bp Feature: domain Description: InsE Location: 83-365 bp Feature: domain Description: InsE Location: 83 -3 65 bp Feature: gene Location: 403-828 bp Feature: domain Description: PHA02517 Location: 427-763 bp Feature: domain Description: PHA02517 Location: 427-763 bp Feature: gene Location: 1420-2943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1693-2425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1693 -2425 bp Feature: domain Description: GIIM Note: maturase Location: 2500-2698 bp Feature: domain Description: GIIM Note: maturase Location: 2500-2698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: ULCS01000014.1 Klebsiella pneumoniae strain EuSCAPE_HU003 genome assembly, contig: 18174_89SCcontig000014, whole genome shotgun sequence (195029 bp)
Overview 1 RT 1: 166342-169380 bp Neighborhood of RT #1 [166342, 169380] PRK09678 RVT-UG11 SmpB Feature: gene Location: 166342-166560 bp Feature: domain Description: PRK09678 Location: 166345-166543 bp Feature: domain Description: PRK09678 Location: 16634 5-16654 3 bp Feature: gene Location: 166807-166995 bp Feature: gene Location: 167438-167737 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 167441-167552 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1674 4 1-167552 bp Feature: gene Location: 168353-168835 bp Feature: domain Description: SmpB Location: 168383-168827 bp Feature: domain Description: SmpB Location: 168383-168827 bp Feature: gene Location: 168967-169380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668)

Seq: ULCS01000017.1 Klebsiella pneumoniae strain EuSCAPE_HU003 genome assembly, contig: 18174_89SCcontig000017, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 112900-1135 63 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 118362-1185 78 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)