myRT

myRT report for GCA_900517155.1_18489_5_106

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Seq: ULCX01000051.1 Klebsiella pneumoniae strain EuSCAPE_ES202 genome assembly, contig: 18489_5106SCcontig000051, whole genome shotgun sequence (8976 bp)
Overview 1 RT 1: 89-3237 bp Neighborhood of RT #1 [89, 3302] RVT-GII GIIM PHA02517 Feature: gene Location: 89-220 bp Feature: gene Location: 469-675 bp Feature: gene Location: 762-2285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035-1767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 035-1 767 bp Feature: domain Description: GIIM Note: maturase Location: 1842-2040 bp Feature: domain Description: GIIM Note: maturase Location: 1 842-2040 bp Feature: gene Location: 2239-2664 bp Feature: gene Location: 2877-3302 bp Feature: domain Description: PHA02517 Location: 2901-3237 bp Feature: domain Description: PHA0251 7 Location: 2901 -3237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: ULCX01000075.1 Klebsiella pneumoniae strain EuSCAPE_ES202 genome assembly, contig: 18489_5106SCcontig000075, whole genome shotgun sequence (1893 bp)
Overview 1 RT 1: 60-1892 bp Neighborhood of RT #1 [60, 1892] RVT-GII Feature: gene Location: 60-1547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: gene Location: 1701-1892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: ULCX01000018.1 Klebsiella pneumoniae strain EuSCAPE_ES202 genome assembly, contig: 18489_5106SCcontig000018, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 112900-113 563 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 113 669-116210 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 1183 62-118578 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)