myRT

myRT report for GCA_900517275.1_18489_5_121

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Seq: ULDJ01000419.1 Klebsiella pneumoniae strain EuSCAPE_ES217 genome assembly, contig: 18489_5121SCcontig000419, whole genome shotgun sequence (248 bp)
Overview 1 RT 1: 3-225 bp Neighborhood of RT #1 [3, 245] RVT-Retrons Feature: gene Location: 3-245 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9-225 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9-225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: ULDJ01000002.1 Klebsiella pneumoniae strain EuSCAPE_ES217 genome assembly, contig: 18489_5121SCcontig000002, whole genome shotgun sequence (500638 bp)
Overview 1 RT 1: 31549-34673 bp 2 RT 2: 105497-109605 bp Neighborhood of RT #1 [31549, 34673] DUF1737 RVT-GII PRK10597 Neighborhood of RT #2 [105497, 109607] DinI RVT-GII PRK10276 umuC Feature: gene Location: 31549-31851 bp Feature: domain Description: DUF1737 Location: 31681-31819 bp Feature: domain Description: DUF1737 Location: 31681-31819 bp Feature: gene Location: 32572-34059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32977-33667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 977-33667 bp Feature: gene Location: 34138-34371 bp Feature: domain Description: PRK10597 Location: 34141-34366 bp Feature: domain Description: PRK10597 Location: 34141-34366 bp Feature: gene Location: 34416-34673 bp Feature: gene Location: 105497-105739 bp Feature: domain Description: DinI Location: 105548-105728 bp Feature: domain Description: DinI Location: 105548-10572 8 bp Feature: gene Location: 105754-105900 bp Feature: gene Location: 106354-107841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106759-107449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106759-107449 bp Feature: gene Location: 107920-108339 bp Feature: domain Description: PRK10276 Location: 107923-108334 bp Feature: domain Description: PRK102 76 Location: 10792 3-108334 bp Feature: gene Location: 108342-109607 bp Feature: domain Description: umuC Location: 108345-109605 bp Feature: domain Description: umuC Location: 108345-109605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1737 (pfam08410), RVT-GII, PRK10597 (DNA damage-inducible protein I; Provisional), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: ULDJ01000007.1 Klebsiella pneumoniae strain EuSCAPE_ES217 genome assembly, contig: 18489_5121SCcontig000007, whole genome shotgun sequence (348620 bp)
Overview 1 RT 1: 17995-21997 bp Neighborhood of RT #1 [17995, 24021] RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like PRK04247 RVT-UG5 Feature: gene Location: 17995-19713 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 18322-18856 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 183 22-18856 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 19306-19684 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 193 06-19684 bp Feature: gene Location: 19724-20824 bp Feature: domain Description: PRK04247 Location: 19787-20018 bp Feature: domain Description: PRK04247 Location: 19787-20018 bp Feature: gene Location: 21004-24021 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 21502-21997 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 21502-21997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like (cd17293), PRK04247 (endonuclease NucS), RVT-UG5