myRT

myRT report for GCA_900517325.1_18489_5_123

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Seq: ULDM01000028.1 Klebsiella pneumoniae strain EuSCAPE_ES220 genome assembly, contig: 18489_5123SCcontig000028, whole genome shotgun sequence (38823 bp)
Overview 1 RT 1: 6378-11483 bp Neighborhood of RT #1 [6378, 11587] RVT-UG17 SLATT_5 Phage_lambda_P Feature: gene Location: 6378-8330 bp Feature: gene Location: 8502-8708 bp Feature: gene Location: 8730-10100 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8958-9564 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 8958-9564 bp Feature: gene Location: 10090-10629 bp Feature: domain Description: SLATT_5 Location: 10096-10606 bp Feature: domain Description: SLATT_5 Location: 1 0096-1 0606 bp Feature: gene Location: 10916-11587 bp Feature: domain Description: Phage_lambda_P Location: 11183-11483 bp Feature: domain Description: Phage_lambda_P Location: 1 1 1 83-1 1 483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), Phage_lambda_P (pfam06992)

Seq: ULDM01000024.1 Klebsiella pneumoniae strain EuSCAPE_ES220 genome assembly, contig: 18489_5123SCcontig000024, whole genome shotgun sequence (59286 bp)
Overview 1 RT 1: 29758-36210 bp Neighborhood of RT #1 [29758, 36210] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 29758-30009 bp Feature: gene Location: 30039-30875 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 30528-30699 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 3052 8-30699 bp Feature: gene Location: 31531-32631 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31711-32245 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31711-32 2 45 bp Feature: gene Location: 32746-35022 bp Feature: domain Description: AAA_15 Location: 32779-33787 bp Feature: domain Description: AAA_15 Location: 32 779-33787 bp Feature: gene Location: 35905-36210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)

Seq: ULDM01000020.1 Klebsiella pneumoniae strain EuSCAPE_ES220 genome assembly, contig: 18489_5123SCcontig000020, whole genome shotgun sequence (76319 bp)
Overview 1 RT 1: 35560-40443 bp Neighborhood of RT #1 [35560, 40445] PRK15110 PRK09951 RVT-UG11 umuC Feature: gene Location: 35560-36525 bp Feature: domain Description: PRK15110 Location: 35563-36523 bp Feature: domain Description: PRK15110 Location: 3 5563 -3 6523 bp Feature: gene Location: 36841-37398 bp Feature: domain Description: PRK09951 Location: 36844-37396 bp Feature: domain Description: PRK09951 Location: 3 6844-3 73 96 bp Feature: gene Location: 37599-38507 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 37872-38328 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3 7872-3 83 28 bp Feature: gene Location: 38767-39024 bp Feature: gene Location: 39180-40445 bp Feature: domain Description: umuC Location: 39183-40443 bp Feature: domain Description: umuC Location: 3 9183 -40443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609)

Seq: ULDM01000052.1 Klebsiella pneumoniae strain EuSCAPE_ES220 genome assembly, contig: 18489_5123SCcontig000052, whole genome shotgun sequence (4545 bp)
Overview 1 RT 1: 112-1309 bp Neighborhood of RT #1 [112, 1320] RVT-GII DUF903 DUF903 Feature: gene Location: 112-738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 33-64 3 bp Feature: gene Location: 844-1071 bp Feature: domain Description: DUF903 Location: 922-1060 bp Feature: domain Description: DUF903 Location: 922-1060 bp Feature: gene Location: 1087-1320 bp Feature: domain Description: DUF903 Location: 1165-1309 bp Feature: domain Description: DUF903 Location: 1165-1309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF903 (pfam06004)