myRT

myRT report for GCA_900517475.1_18489_5_146

Download annotations/find similar RTs

Seq: ULED01000022.1 Klebsiella pneumoniae strain EuSCAPE_ES242 genome assembly, contig: 18489_5146SCcontig000022, whole genome shotgun sequence (92390 bp)
Overview 1 RT 1: 89163-91996 bp Neighborhood of RT #1 [89163, 92388] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 89163-89834 bp Feature: domain Description: Plasmid_stab_B Location: 89178-89385 bp Feature: domain Description: Plasmid_stab_B Location: 891 78-89385 bp Feature: domain Description: Plasmid_stab_B Location: 89490-89697 bp Feature: domain Description: Plasmid_stab_B Location: 89490-89697 bp Feature: gene Location: 89837-90811 bp Feature: domain Description: StbA Location: 89843-90788 bp Feature: domain Description: StbA Location: 89843-90788 bp Feature: gene Location: 91057-92388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91306-91996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 306-91 996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: ULED01000028.1 Klebsiella pneumoniae strain EuSCAPE_ES242 genome assembly, contig: 18489_5146SCcontig000028, whole genome shotgun sequence (29220 bp)
Overview 1 RT 1: 22909-27753 bp Neighborhood of RT #1 [22909, 27755] HTH_17 PHA02517 RVT-GII GIIM PHA02517 PFDH_like Feature: gene Location: 22909-23190 bp Feature: domain Description: HTH_17 Location: 22936-23080 bp Feature: domain Description: HTH_17 Location: 2 2 936-2 3080 bp Feature: gene Location: 23270-23734 bp Feature: domain Description: PHA02517 Location: 23333-23669 bp Feature: domain Description: PHA02 517 Location: 2 3333-2 3669 bp Feature: gene Location: 24322-25845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24595-25327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4595-2 532 7 bp Feature: domain Description: GIIM Note: maturase Location: 25405-25600 bp Feature: domain Description: GIIM Note: maturase Location: 2 5405-2 5600 bp Feature: gene Location: 26022-26219 bp Feature: domain Description: PHA02517 Location: 26025-26175 bp Feature: domain Description: PHA02 517 Location: 2 602 5-2 6175 bp Feature: gene Location: 26622-27755 bp Feature: domain Description: PFDH_like Location: 26625-27753 bp Feature: domain Description: PFDH_like Location: 2 662 5-2 7753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PFDH_like (cd08282)