myRT

myRT report for GCA_900517545.1_18489_5_154

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Seq: ULEK01000058.1 Klebsiella pneumoniae strain EuSCAPE_ES250 genome assembly, contig: 18489_5154SCcontig000058, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1891 bp Neighborhood of RT #1 [59, 1891] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1 1 54 bp Feature: gene Location: 1700-1891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: ULEK01000050.1 Klebsiella pneumoniae strain EuSCAPE_ES250 genome assembly, contig: 18489_5154SCcontig000050, whole genome shotgun sequence (3035 bp)
Overview 1 RT 1: 93-2540 bp Neighborhood of RT #1 [93, 2540] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1910-2347 bp Feature: gene Location: 2352-2540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: ULEK01000024.1 Klebsiella pneumoniae strain EuSCAPE_ES250 genome assembly, contig: 18489_5154SCcontig000024, whole genome shotgun sequence (55040 bp)
Overview 1 RT 1: 2593-7523 bp Neighborhood of RT #1 [2593, 7549] PRK09776 PAS_9 PleD RVT-UG4 Prim_Zn_Ribbon Toprim_3 Feature: gene Location: 2593-3864 bp Feature: domain Description: PRK09776 Location: 2701-3007 bp Feature: domain Description: PRK09776 Location: 2701-3 007 bp Feature: domain Description: PAS_9 Location: 3025-3331 bp Feature: domain Description: PAS_9 Location: 3 025-3 3 3 1 bp Feature: domain Description: PleD Location: 3331-3835 bp Feature: domain Description: PleD Location: 3 3 3 1-3 83 5 bp Feature: gene Location: 4219-4761 bp Feature: gene Location: 4816-5568 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5212-5467 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5212-5467 bp Feature: gene Location: 5685-6392 bp Feature: gene Location: 6482-7549 bp Feature: domain Description: Prim_Zn_Ribbon Location: 6593-6707 bp Feature: domain Description: Prim_Zn_Ribbon Location: 6593 -6707 bp Feature: domain Description: Toprim_3 Location: 7229-7523 bp Feature: domain Description: Toprim_3 Location: 7229-7523 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09776 (putative diguanylate cyclase; Provisional), PAS_9 (pfam13426), PleD (COG3706), RVT-UG4, Prim_Zn_Ribbon (smart00778), Toprim_3 (pfam13362)

Seq: ULEK01000012.1 Klebsiella pneumoniae strain EuSCAPE_ES250 genome assembly, contig: 18489_5154SCcontig000012, whole genome shotgun sequence (146943 bp)
Overview 1 RT 1: 31990-38843 bp Neighborhood of RT #1 [31990, 38860] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31990-32655 bp Feature: domain Description: INT_P4_C Location: 32095-32653 bp Feature: domain Description: INT_P4 _C Location: 32095-32653 bp Feature: gene Location: 32916-33356 bp Feature: domain Description: Integrase_1 Location: 32922-33138 bp Feature: domain Description: Integrase_1 Location: 32922-33138 bp Feature: gene Location: 33413-35491 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33821-34265 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33821-34 265 bp Feature: gene Location: 35491-38100 bp Feature: domain Description: FimD Location: 35548-38089 bp Feature: domain Description: FimD Location: 3554 8-38089 bp Feature: gene Location: 38132-38860 bp Feature: domain Description: FimC Location: 38180-38843 bp Feature: domain Description: FimC Location: 38180-3884 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)