myRT

myRT report for GCA_900517635.1_18489_5_21

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Seq: ULEX01000018.1 Klebsiella pneumoniae strain EuSCAPE_ES281 genome assembly, contig: 18489_521SCcontig000018, whole genome shotgun sequence (103364 bp)
Overview 1 RT 1: 31972-38825 bp Neighborhood of RT #1 [31972, 38842] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31972-32637 bp Feature: domain Description: INT_P4_C Location: 32077-32635 bp Feature: domain Description: INT_P4_C Location: 32077-32635 bp Feature: gene Location: 32898-33338 bp Feature: domain Description: Integrase_1 Location: 32904-33120 bp Feature: domain Description: Integrase_1 Location: 32904-331 20 bp Feature: gene Location: 33395-35473 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33803-34247 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33803-34247 bp Feature: gene Location: 35473-38082 bp Feature: domain Description: FimD Location: 35530-38071 bp Feature: domain Description: FimD Location: 35530-38071 bp Feature: gene Location: 38114-38842 bp Feature: domain Description: FimC Location: 38162-38825 bp Feature: domain Description: FimC Location: 381 62-38825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: ULEX01000010.1 Klebsiella pneumoniae strain EuSCAPE_ES281 genome assembly, contig: 18489_521SCcontig000010, whole genome shotgun sequence (206125 bp)
Overview 1 RT 1: 14010-23718 bp Neighborhood of RT #1 [14010, 23738] AAA_13 AAA_13 COG0610 RVT-Retrons AAA_15 AAA_15 COG2958 Feature: gene Location: 14010-15188 bp Feature: domain Description: AAA_13 Location: 14103-14277 bp Feature: domain Description: AAA_13 Location: 14103-142 77 bp Feature: domain Description: AAA_13 Location: 14499-15072 bp Feature: domain Description: AAA_13 Location: 14499-15072 bp Feature: gene Location: 15181-18300 bp Feature: domain Description: COG0610 Location: 15265-18277 bp Feature: domain Description: COG0610 Location: 152 65-182 77 bp Feature: gene Location: 18842-19942 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18983-19544 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18983-19544 bp Feature: gene Location: 20115-22232 bp Feature: domain Description: AAA_15 Location: 20118-20535 bp Feature: domain Description: AAA_15 Location: 2 0118-2 0535 bp Feature: domain Description: AAA_15 Location: 20673-21099 bp Feature: domain Description: AAA_15 Location: 2 0673-2 1099 bp Feature: gene Location: 22806-23738 bp Feature: domain Description: COG2958 Location: 22824-23718 bp Feature: domain Description: COG2 958 Location: 2 2 82 4-2 3718 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_13 (pfam13166), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-Retrons, AAA_15 (pfam13175), COG2958 (Uncharacterized protein )