myRT

myRT report for GCA_900536915.1_Ecoli_2009_44

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Seq: LS992713.1 Escherichia coli strain ST73 genome assembly, scaffold: scaffold24.1, whole genome shotgun sequence (42548 bp)
Overview 1 RT 1: 11533-16807 bp Neighborhood of RT #1 [11533, 16860] rve PHA02517 RVT-GII GIIM PHA02517 autotrans_barl Feature: gene Location: 11533-13032 bp Feature: domain Description: rve Location: 11905-12298 bp Feature: domain Description: rve Location: 1 1 905-1 2298 bp Feature: gene Location: 13253-13534 bp Feature: domain Description: PHA02517 Location: 13259-13469 bp Feature: domain Description: PHA0251 7 Location: 1 3259-1 3469 bp Feature: gene Location: 14192-15715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14465-15197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4465-1 51 97 bp Feature: domain Description: GIIM Note: maturase Location: 15275-15470 bp Feature: domain Description: GIIM Note: maturase Location: 1 5275-1 5470 bp Feature: gene Location: 15716-16090 bp Feature: domain Description: PHA02517 Location: 15728-16088 bp Feature: domain Description: PHA0251 7 Location: 1 5728-1 6088 bp Feature: gene Location: 16243-16860 bp Feature: domain Description: autotrans_barl Location: 16366-16807 bp Feature: domain Description: autotrans_barl Location: 1 6366-1 6807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), autotrans_barl (TIGR01414)