myRT

myRT report for GCA_900538055.3_ERZ1024078

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Seq: UZAC03000001.1 Pasteuria penetrans isolate RES148 genome assembly, contig: gnlJHIPPRES148_1, whole genome shotgun sequence (2186542 bp)
Overview 1 RT 1: 61186-65007 bp 2 RT 2: 278882-281342 bp 3 RT 3: 312680-318580 bp 4 RT 4: 436982-439798 bp 5 RT 5: 512445-514739 bp 6 RT 6: 534258-536590 bp 7 RT 7: 691580-697673 bp 8 RT 8: 804713-809779 bp 9 RT 9: 1418266-1423391 bp 10 RT 10: 1442232-1445653 bp 11 RT 11: 1738605-1743401 bp 12 RT 12: 1774665-1781147 bp 13 RT 13: 1954298-1957889 bp 14 RT 14: 1994311-2004243 bp 15 RT 15: 2008226-2011032 bp 16 RT 16: 2099636-2104931 bp Neighborhood of RT #1 [61186, 65057] FtsX RVT-GII Transposase_mut Neighborhood of RT #2 [278882, 281365] Transposase_mut Transposase_mut RVT-GII PRK09601 YchF Neighborhood of RT #3 [312680, 318642] DDE_Tnp_1 group_II_RT_mat RVT-GII DDE_Tnp_1_6 Neighborhood of RT #4 [436982, 439798] RVT-GII RVT-GII GIIM Neighborhood of RT #5 [512445, 514750] RVT-GII PRK07756 Neighborhood of RT #6 [534258, 536590] RVT-GII Neighborhood of RT #7 [691580, 697673] RVT-GII YdiL RVT-GII GIIM Neighborhood of RT #8 [804713, 809779] Transposase_mut RVT-GII GIIM Neighborhood of RT #9 [1418266, 1423391] RVT-GII GIIM DDE_Tnp_1_6 Neighborhood of RT #10 [1442232, 1445653] Transposase_mut RVT-GII Neighborhood of RT #11 [1738605, 1743401] RVT-GII RVT-DGRs Neighborhood of RT #12 [1774665, 1781155] GH18_chitinase GH18_chitinase RVT-GII Intron_maturas2 CSD Neighborhood of RT #13 [1954298, 1957889] RsmB RsmF_methylt_CI RVT-GII Neighborhood of RT #14 [1994311, 2004243] COG2355 RVT-GII GIIM Transposase_mut RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #15 [2008226, 2011032] rve RVT-GII Neighborhood of RT #16 [2099636, 2104931] Caa3_CtaG M42_Frv RVT-CRISPR-like GIIM Feature: gene Location: 61186-63288 bp Feature: domain Description: FtsX Location: 61435-61702 bp Feature: domain Description: FtsX Location: 61 435-61 702 bp Feature: gene Location: 63513-63668 bp Feature: gene Location: 63699-64298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63924-64296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63924-64296 bp Feature: gene Location: 64329-64514 bp Feature: gene Location: 64584-65057 bp Feature: domain Description: Transposase_mut Location: 64596-65007 bp Feature: domain Description: Transposase_mut Location: 64596-65007 bp Feature: gene Location: 278882-279160 bp Feature: domain Description: Transposase_mut Location: 278918-279140 bp Feature: domain Description: Transposase_mut Location: 27891 8-2791 40 bp Feature: gene Location: 279233-279517 bp Feature: domain Description: Transposase_mut Location: 279251-279455 bp Feature: domain Description: Transposase_mut Location: 279251 -279455 bp Feature: gene Location: 279999-280229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280014-280224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28001 4-280224 bp Feature: gene Location: 280467-281048 bp Feature: domain Description: PRK09601 Location: 280470-280902 bp Feature: domain Description: PRK09601 Location: 280470-280902 bp Feature: gene Location: 281198-281365 bp Feature: domain Description: YchF Location: 281204-281342 bp Feature: domain Description: YchF Location: 281 204-281 342 bp Feature: gene Location: 312680-313699 bp Feature: domain Description: DDE_Tnp_1 Location: 313169-313616 bp Feature: domain Description: DDE_Tnp_1 Location: 31 31 69-31 361 6 bp Feature: gene Location: 313837-314334 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 313840-314227 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 31 3840-31 4227 bp Feature: gene Location: 314453-315163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 314738-315122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 4738-31 51 22 bp Feature: gene Location: 315307-315480 bp Feature: gene Location: 316831-318642 bp Feature: domain Description: DDE_Tnp_1_6 Location: 318214-318580 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 31 821 4-31 8580 bp Feature: gene Location: 436982-437161 bp Feature: gene Location: 437252-437431 bp Feature: gene Location: 437522-438076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 437687-438074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 437687-438074 bp Feature: gene Location: 438125-438676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 438131-438350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4381 31 -438350 bp Feature: domain Description: GIIM Note: maturase Location: 438437-438614 bp Feature: domain Description: GIIM Note: maturase Location: 438437-43861 4 bp Feature: gene Location: 439275-439415 bp Feature: gene Location: 439478-439798 bp Feature: gene Location: 512445-512636 bp Feature: gene Location: 512699-512944 bp Feature: gene Location: 513144-513446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 513264-513423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 3264-51 3423 bp Feature: gene Location: 513757-513996 bp Feature: gene Location: 514331-514750 bp Feature: domain Description: PRK07756 Location: 514385-514739 bp Feature: domain Description: PRK07756 Location: 51 4385-51 4739 bp Feature: gene Location: 534258-534410 bp Feature: gene Location: 534961-535230 bp Feature: gene Location: 535331-535651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 535337-535511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 535337-53551 1 bp Feature: gene Location: 535648-535800 bp Feature: gene Location: 536315-536590 bp Feature: gene Location: 691580-691720 bp Feature: gene Location: 691836-692066 bp Feature: gene Location: 692104-692553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692137-692542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6921 37-692542 bp Feature: gene Location: 692670-692804 bp Feature: gene Location: 692905-693123 bp Feature: gene Location: 694141-695145 bp Feature: domain Description: YdiL Location: 694528-695122 bp Feature: domain Description: YdiL Location: 694528-6951 22 bp Feature: gene Location: 695384-695557 bp Feature: gene Location: 695701-697026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 695986-696640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 695986-696640 bp Feature: domain Description: GIIM Note: maturase Location: 696733-696946 bp Feature: domain Description: GIIM Note: maturase Location: 696733-696946 bp Feature: gene Location: 697127-697282 bp Feature: gene Location: 697323-697673 bp Feature: gene Location: 804713-805072 bp Feature: gene Location: 805887-807224 bp Feature: domain Description: Transposase_mut Location: 806097-807117 bp Feature: domain Description: Transposase_mut Location: 806097-8071 1 7 bp Feature: gene Location: 807454-808599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 807676-808333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 807676-808333 bp Feature: domain Description: GIIM Note: maturase Location: 808420-808579 bp Feature: domain Description: GIIM Note: maturase Location: 808420-808579 bp Feature: gene Location: 808584-808838 bp Feature: gene Location: 809255-809779 bp Feature: gene Location: 1418266-1418448 bp Feature: gene Location: 1418558-1418839 bp Feature: gene Location: 1418893-1420164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1419115-1419772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 91 1 5-1 41 9772 bp Feature: domain Description: GIIM Note: maturase Location: 1419859-1420087 bp Feature: domain Description: GIIM Note: maturase Location: 1 41 9859-1 420087 bp Feature: gene Location: 1421266-1423077 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1422652-1423015 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 422652-1 42301 5 bp Feature: gene Location: 1423254-1423391 bp Feature: gene Location: 1442232-1443569 bp Feature: domain Description: Transposase_mut Location: 1442445-1443462 bp Feature: domain Description: Transposase_mut Location: 1 442445-1 443462 bp Feature: gene Location: 1443943-1444125 bp Feature: gene Location: 1444366-1445043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1444393-1444960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 444393-1 444960 bp Feature: gene Location: 1445185-1445328 bp Feature: gene Location: 1445480-1445653 bp Feature: gene Location: 1738605-1738757 bp Feature: gene Location: 1739090-1739239 bp Feature: gene Location: 1739921-1740106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1739927-1740098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 739927-1 740098 bp Feature: gene Location: 1740110-1740289 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1740143-1740224 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 7401 43-1 740224 bp Feature: gene Location: 1740865-1741605 bp Feature: gene Location: 1742700-1743401 bp Feature: gene Location: 1774665-1775963 bp Feature: domain Description: GH18_chitinase Location: 1774830-1775850 bp Feature: domain Description: GH1 8_chitinase Location: 1 774830-1 775850 bp Feature: gene Location: 1776531-1777817 bp Feature: domain Description: GH18_chitinase Location: 1776696-1777746 bp Feature: domain Description: GH1 8_chitinase Location: 1 776696-1 777746 bp Feature: gene Location: 1778725-1780152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1779070-1779670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 779070-1 779670 bp Feature: domain Description: Intron_maturas2 Location: 1779817-1780009 bp Feature: domain Description: Intron_maturas2 Location: 1 77981 7-1 780009 bp Feature: gene Location: 1780386-1780649 bp Feature: gene Location: 1780841-1781155 bp Feature: domain Description: CSD Location: 1780958-1781147 bp Feature: domain Description: CSD Location: 1 780958-1 781 1 47 bp Feature: gene Location: 1954298-1954513 bp Feature: gene Location: 1954510-1955925 bp Feature: domain Description: RsmB Location: 1954525-1955431 bp Feature: domain Description: RsmB Location: 1 954525-1 955431 bp Feature: domain Description: RsmF_methylt_CI Location: 1955536-1955692 bp Feature: domain Description: RsmF_methylt_CI Location: 1 955536-1 955692 bp Feature: gene Location: 1956176-1956556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1956233-1956449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 956233-1 956449 bp Feature: gene Location: 1956747-1957676 bp Feature: gene Location: 1957758-1957889 bp Feature: gene Location: 1994311-1995315 bp Feature: domain Description: COG2355 Location: 1994317-1995271 bp Feature: domain Description: COG2355 Location: 1 99431 7-1 995271 bp Feature: gene Location: 1995314-1995508 bp Feature: gene Location: 1995719-1996990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1995941-1996598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 995941 -1 996598 bp Feature: domain Description: GIIM Note: maturase Location: 1996685-1996913 bp Feature: domain Description: GIIM Note: maturase Location: 1 996685-1 99691 3 bp Feature: gene Location: 1997896-1998102 bp Feature: gene Location: 1998532-1999872 bp Feature: domain Description: Transposase_mut Location: 1999411-1999861 bp Feature: domain Description: Transposase_mut Location: 1 99941 1 -1 999861 bp Feature: gene Location: 2000434-2000607 bp Feature: gene Location: 2000751-2002076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2001036-2001690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2001 036-2001 690 bp Feature: domain Description: GIIM Note: maturase Location: 2001783-2001996 bp Feature: domain Description: GIIM Note: maturase Location: 2001 783-2001 996 bp Feature: gene Location: 2002214-2003233 bp Feature: domain Description: DDE_Tnp_1 Location: 2002703-2003150 bp Feature: domain Description: DDE_Tnp_1 Location: 2002703-20031 50 bp Feature: gene Location: 2003704-2004243 bp Feature: gene Location: 2008226-2008738 bp Feature: domain Description: rve Location: 2008229-2008550 bp Feature: domain Description: rve Location: 2008229-2008550 bp Feature: gene Location: 2008804-2008974 bp Feature: gene Location: 2009304-2010365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2009526-2010183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2009526-201 01 83 bp Feature: gene Location: 2010366-2010575 bp Feature: gene Location: 2010865-2011032 bp Feature: gene Location: 2099636-2100592 bp Feature: domain Description: Caa3_CtaG Location: 2099816-2100512 bp Feature: domain Description: Caa3_CtaG Location: 209981 6-21 0051 2 bp Feature: gene Location: 2101211-2102320 bp Feature: domain Description: M42_Frv Location: 2101250-2102273 bp Feature: domain Description: M42_Frv Location: 21 01 250-21 02273 bp Feature: gene Location: 2102991-2104337 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2103336-2103843 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 21 03336-21 03843 bp Feature: domain Description: GIIM Note: maturase Location: 2104014-2104215 bp Feature: domain Description: GIIM Note: maturase Location: 21 0401 4-21 0421 5 bp Feature: gene Location: 2104488-2104691 bp Feature: gene Location: 2104758-2104931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsX (pfam02687), RVT-GII, Transposase_mut (pfam00872), PRK09601 (redox-regulated ATPase YchF), YchF (cd01900), DDE_Tnp_1 (pfam01609), group_II_RT_mat (TIGR04416), DDE_Tnp_1_6 (pfam13751), GIIM (pfam08388), PRK07756 (NADH-quinone oxidoreductase subunit A)
YdiL (COG1266), RVT-DGRs, GH18_chitinase (cd06548), Intron_maturas2 (pfam01348), CSD (pfam00313), RsmB (COG0144), RsmF_methylt_CI (pfam17126), COG2355 (Zn-dependent dipeptidase, microsomal dipeptidase homolog ), rve (pfam00665), Caa3_CtaG (pfam09678)
M42_Frv (cd05656), RVT-CRISPR

Seq: UZAC03000002.1 Pasteuria penetrans isolate RES148 genome assembly, contig: gnlJHIPPRES148_2, whole genome shotgun sequence (152029 bp)
Overview 1 RT 1: 14866-23637 bp Neighborhood of RT #1 [14866, 23637] group_II_RT_mat RVT-GII GIIM Feature: gene Location: 14866-15048 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 14869-15001 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 14869-15001 bp Feature: gene Location: 15099-18350 bp Feature: gene Location: 18455-19576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18515-19172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18515-19172 bp Feature: domain Description: GIIM Note: maturase Location: 19259-19487 bp Feature: domain Description: GIIM Note: maturase Location: 192 59-19487 bp Feature: gene Location: 20743-23214 bp Feature: gene Location: 23455-23637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388)