myRT

myRT report for GCA_900539175.1_UMGS96

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Seq: UQAW01000003.1 uncultured Lachnospiraceae bacterium isolate UMGS96 genome assembly, contig: NODE_6_length_101093_cov_5.93593, whole genome shotgun sequence (101093 bp)
Overview 1 RT 1: 48957-53677 bp Neighborhood of RT #1 [48957, 53694] PRK03739 DDE_Tnp_1_6 RVT-GII NagC PRK00347 Feature: gene Location: 48957-50618 bp Feature: domain Description: PRK03739 Location: 48963-50613 bp Feature: domain Description: PRK03739 Location: 48963-5061 3 bp Feature: gene Location: 50791-51063 bp Feature: domain Description: DDE_Tnp_1_6 Location: 50797-51007 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 50797-51 007 bp Feature: gene Location: 51288-51479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51300-51429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 300-51 429 bp Feature: gene Location: 51607-52839 bp Feature: domain Description: NagC Location: 51901-52792 bp Feature: domain Description: NagC Location: 51 901 -52792 bp Feature: gene Location: 52978-53694 bp Feature: domain Description: PRK00347 Location: 52999-53677 bp Feature: domain Description: PRK00347 Location: 52999-53677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03739 (2-isopropylmalate synthase; Validated), DDE_Tnp_1_6 (pfam13751), RVT-GII, NagC (COG1940), PRK00347 (DNA/RNA nuclease SfsA)

Seq: UQAW01000010.1 uncultured Lachnospiraceae bacterium isolate UMGS96 genome assembly, contig: NODE_20_length_76205_cov_7.85812, whole genome shotgun sequence (76205 bp)
Overview 1 RT 1: 71581-76202 bp Neighborhood of RT #1 [71581, 76202] RnaY AAA-ATPase_like PDDEXK_9 RVT-GII GIIM Feature: gene Location: 71581-72087 bp Feature: domain Description: RnaY Location: 71662-71842 bp Feature: domain Description: RnaY Location: 71662 -71842 bp Feature: gene Location: 72198-73958 bp Feature: domain Description: AAA-ATPase_like Location: 72258-73149 bp Feature: domain Description: AAA-ATPase_like Location: 72 2 58-73149 bp Feature: domain Description: PDDEXK_9 Location: 73629-73926 bp Feature: domain Description: PDDEXK_9 Location: 7362 9-7392 6 bp Feature: gene Location: 74602-75900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74860-75547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74860-75547 bp Feature: domain Description: GIIM Note: maturase Location: 75607-75838 bp Feature: domain Description: GIIM Note: maturase Location: 75607-75838 bp Feature: gene Location: 76050-76202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RnaY (COG1418), AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011), RVT-GII, GIIM (pfam08388)

Seq: UQAW01000031.1 uncultured Lachnospiraceae bacterium isolate UMGS96 genome assembly, contig: NODE_77_length_37134_cov_7.58432, whole genome shotgun sequence (37134 bp)
Overview 1 RT 1: 1222-8038 bp Neighborhood of RT #1 [1222, 8292] RVT-GII GIIM RVT-GII GIIM TauA AmyAc_bac2_AmyA Feature: gene Location: 1222-1998 bp Feature: gene Location: 2027-2230 bp Feature: gene Location: 2490-3908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2847-3462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2847-3 462 bp Feature: domain Description: GIIM Note: maturase Location: 3522-3747 bp Feature: domain Description: GIIM Note: maturase Location: 3 522-3 747 bp Feature: gene Location: 4463-5704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4667-5324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4667-53 24 bp Feature: domain Description: GIIM Note: maturase Location: 5405-5624 bp Feature: domain Description: GIIM Note: maturase Location: 5405-5624 bp Feature: gene Location: 5917-6426 bp Feature: domain Description: TauA Location: 6013-6418 bp Feature: domain Description: TauA Location: 6013 -6418 bp Feature: gene Location: 6529-8292 bp Feature: domain Description: AmyAc_bac2_AmyA Location: 6787-8038 bp Feature: domain Description: AmyAc_bac2_AmyA Location: 6787-803 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TauA (COG4521), AmyAc_bac2_AmyA (cd11316)

Seq: UQAW01000036.1 uncultured Lachnospiraceae bacterium isolate UMGS96 genome assembly, contig: NODE_89_length_34009_cov_6.86694, whole genome shotgun sequence (34009 bp)
Overview 1 RT 1: 12769-17160 bp Neighborhood of RT #1 [12769, 17195] RVT-CRISPR COG4951 COG4951 Cas2_I_II_III Cas1_I-II-III Feature: gene Location: 12769-12966 bp Feature: gene Location: 12983-13150 bp Feature: gene Location: 13176-15896 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 13383-13956 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 13383-13956 bp Feature: domain Description: COG4951 Location: 14619-14727 bp Feature: domain Description: COG4 951 Location: 14 619-14 727 bp Feature: domain Description: COG4951 Location: 14823-15174 bp Feature: domain Description: COG4 951 Location: 14 823-15174 bp Feature: gene Location: 15923-16234 bp Feature: domain Description: Cas2_I_II_III Location: 15956-16190 bp Feature: domain Description: Cas2_I_II_III Location: 15956-16190 bp Feature: gene Location: 16209-17195 bp Feature: domain Description: Cas1_I-II-III Location: 16218-17160 bp Feature: domain Description: Cas1_I-II-III Location: 16218-17160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, COG4951 (Uncharacterized protein ), Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656)