myRT

myRT report for GCA_900539405.1_UMGS122

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Seq: UQBV01000010.1 uncultured Paenibacillus sp. isolate UMGS122 genome assembly, contig: NODE_30_length_176543_cov_46.5645, whole genome shotgun sequence (176543 bp)
Overview 1 RT 1: 21663-32237 bp 2 RT 2: 59551-62785 bp Neighborhood of RT #1 [21663, 32269] SplB RVT-GII GIIM Glug Glug Glug Glug Glug Big_2 Cadherin-like SLH SLH SLH RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 Cadherin-like CHB_HEX_C_1 FN3 Cadherin-like SLH SLH SLH Neighborhood of RT #2 [59551, 63027] PHA02517 RVT-GII GIIM DDE_5 Feature: gene Location: 21663-21848 bp Feature: gene Location: 22088-22489 bp Feature: domain Description: SplB Location: 22091-22409 bp Feature: domain Description: SplB Location: 22091 -22409 bp Feature: gene Location: 23309-24601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23609-24242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23609-24242 bp Feature: domain Description: GIIM Note: maturase Location: 24371-24539 bp Feature: domain Description: GIIM Note: maturase Location: 24371 -24539 bp Feature: gene Location: 25170-28469 bp Feature: domain Description: Glug Location: 25641-25704 bp Feature: domain Description: Glug Location: 25641 -25704 bp Feature: domain Description: Glug Location: 25809-25890 bp Feature: domain Description: Glug Location: 25809-25890 bp Feature: domain Description: Glug Location: 25905-25992 bp Feature: domain Description: Glug Location: 25905-25992 bp Feature: domain Description: Glug Location: 26004-26088 bp Feature: domain Description: Glug Location: 26004-26088 bp Feature: domain Description: Glug Location: 26091-26190 bp Feature: domain Description: Glug Location: 26091 -261 90 bp Feature: domain Description: Big_2 Location: 26529-26652 bp Feature: domain Description: Big_2 Location: 26529-26652 bp Feature: domain Description: Cadherin-like Location: 27654-27888 bp Feature: domain Description: Cadherin-like Location: 27654-27888 bp Feature: domain Description: SLH Location: 27933-28053 bp Feature: domain Description: SLH Location: 27933-28053 bp Feature: domain Description: SLH Location: 28116-28245 bp Feature: domain Description: SLH Location: 281 1 6-28245 bp Feature: domain Description: SLH Location: 28299-28428 bp Feature: domain Description: SLH Location: 28299-28428 bp Feature: gene Location: 28679-32269 bp Feature: domain Description: RCC1_2 Location: 28856-28934 bp Feature: domain Description: RCC1 _2 Location: 28856-28934 bp Feature: domain Description: RCC1_2 Location: 28976-29060 bp Feature: domain Description: RCC1 _2 Location: 28976-29060 bp Feature: domain Description: RCC1_2 Location: 29096-29189 bp Feature: domain Description: RCC1 _2 Location: 29096-291 89 bp Feature: domain Description: RCC1_2 Location: 29222-29306 bp Feature: domain Description: RCC1 _2 Location: 29222-29306 bp Feature: domain Description: RCC1_2 Location: 29342-29429 bp Feature: domain Description: RCC1 _2 Location: 29342-29429 bp Feature: domain Description: RCC1_2 Location: 29462-29564 bp Feature: domain Description: RCC1 _2 Location: 29462-29564 bp Feature: domain Description: RCC1_2 Location: 29597-29684 bp Feature: domain Description: RCC1 _2 Location: 29597-29684 bp Feature: domain Description: RCC1_2 Location: 29726-29798 bp Feature: domain Description: RCC1 _2 Location: 29726-29798 bp Feature: domain Description: RCC1_2 Location: 29840-29918 bp Feature: domain Description: RCC1 _2 Location: 29840-2991 8 bp Feature: domain Description: RCC1_2 Location: 29960-30029 bp Feature: domain Description: RCC1 _2 Location: 29960-30029 bp Feature: domain Description: RCC1_2 Location: 30086-30161 bp Feature: domain Description: RCC1 _2 Location: 30086-301 61 bp Feature: domain Description: RCC1_2 Location: 30203-30290 bp Feature: domain Description: RCC1 _2 Location: 30203-30290 bp Feature: domain Description: RCC1_2 Location: 30320-30407 bp Feature: domain Description: RCC1 _2 Location: 30320-30407 bp Feature: domain Description: RCC1_2 Location: 30437-30524 bp Feature: domain Description: RCC1 _2 Location: 30437-30524 bp Feature: domain Description: Cadherin-like Location: 30587-30824 bp Feature: domain Description: Cadherin-like Location: 30587-30824 bp Feature: domain Description: CHB_HEX_C_1 Location: 30872-31064 bp Feature: domain Description: CHB_HEX_C_1 Location: 30872-31 064 bp Feature: domain Description: FN3 Location: 31097-31367 bp Feature: domain Description: FN3 Location: 31 097-31 367 bp Feature: domain Description: Cadherin-like Location: 31481-31715 bp Feature: domain Description: Cadherin-like Location: 31 481 -31 71 5 bp Feature: domain Description: SLH Location: 31748-31868 bp Feature: domain Description: SLH Location: 31 748-31 868 bp Feature: domain Description: SLH Location: 31922-32054 bp Feature: domain Description: SLH Location: 31 922-32054 bp Feature: domain Description: SLH Location: 32111-32237 bp Feature: domain Description: SLH Location: 321 1 1 -32237 bp Feature: gene Location: 59551-59901 bp Feature: domain Description: PHA02517 Location: 59638-59887 bp Feature: domain Description: PHA0251 7 Location: 59638-59887 bp Feature: gene Location: 60171-60464 bp Feature: gene Location: 60669-61976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60954-61593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60954-61 593 bp Feature: domain Description: GIIM Note: maturase Location: 61671-61893 bp Feature: domain Description: GIIM Note: maturase Location: 61 671 -61 893 bp Feature: gene Location: 62007-62225 bp Feature: gene Location: 62479-63027 bp Feature: domain Description: DDE_5 Location: 62599-62785 bp Feature: domain Description: DDE_5 Location: 62599-62785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SplB, RVT-GII, GIIM (pfam08388), Glug (pfam07581), Big_2 (pfam02368), Cadherin-like (pfam12733), SLH (pfam00395), RCC1_2 (pfam13540), CHB_HEX_C_1 (pfam13290), FN3 (smart00060)
PHA02517 (putative transposase OrfB; Reviewed), DDE_5 (pfam13546)

Seq: UQBV01000048.1 uncultured Paenibacillus sp. isolate UMGS122 genome assembly, contig: NODE_166_length_38222_cov_44.9031, whole genome shotgun sequence (38222 bp)
Overview 1 RT 1: 21394-26092 bp Neighborhood of RT #1 [21394, 26092] Acetyltransf_1 SseA RVT-UG7 7TMR-DISM_7TM Feature: gene Location: 21394-21915 bp Feature: domain Description: Acetyltransf_1 Location: 21556-21841 bp Feature: domain Description: Acetyltransf_1 Location: 2 1556-2 1841 bp Feature: gene Location: 22157-23011 bp Feature: domain Description: SseA Location: 22160-23006 bp Feature: domain Description: SseA Location: 2 2 160-2 3006 bp Feature: gene Location: 23353-24909 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 23743-24166 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2 3743-2 4166 bp Feature: gene Location: 25196-25510 bp Feature: domain Description: 7TMR-DISM_7TM Location: 25256-25487 bp Feature: domain Description: 7TMR-DISM_7TM Location: 2 52 56-2 5487 bp Feature: gene Location: 25874-26092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), SseA (COG2897), RVT-UG7, 7TMR-DISM_7TM (pfam07695)