myRT

myRT report for GCA_900540165.1_UMGS219

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Seq: UQFJ01000003.1 uncultured Bacteroides sp. isolate UMGS219 genome assembly, contig: NODE_5_length_54055_cov_3.27302, whole genome shotgun sequence (54055 bp)
Overview 1 RT 1: 50606-53675 bp Neighborhood of RT #1 [50606, 54052] RibD_C TraG-D_C RVT_N RVT-GII GIIM Feature: gene Location: 50606-51022 bp Feature: domain Description: RibD_C Location: 50834-50996 bp Feature: domain Description: RibD_C Location: 50834-50996 bp Feature: gene Location: 51322-52557 bp Feature: domain Description: TraG-D_C Location: 51901-52237 bp Feature: domain Description: TraG-D_C Location: 51 901 -52237 bp Feature: gene Location: 52562-54052 bp Feature: RT Description: RVT_N Location: 52565-52697 bp Feature: RT Description: RVT_N Location: 52565-52697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52742-53390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52742-53390 bp Feature: domain Description: GIIM Note: maturase Location: 53444-53675 bp Feature: domain Description: GIIM Note: maturase Location: 53444-53675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RibD_C (pfam01872), TraG-D_C (pfam12696), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: UQFJ01000069.1 uncultured Bacteroides sp. isolate UMGS219 genome assembly, contig: NODE_137_length_17877_cov_2.71569, whole genome shotgun sequence (17877 bp)
Overview 1 RT 1: 64-1982 bp Neighborhood of RT #1 [64, 1982] RVT-DGRs YfmG Feature: gene Location: 64-693 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 217-685 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 17-685 bp Feature: gene Location: 952-1134 bp Feature: domain Description: YfmG Location: 997-1123 bp Feature: domain Description: YfmG Location: 997-112 3 bp Feature: gene Location: 1443-1982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, YfmG (COG1262)

Seq: UQFJ01000107.1 uncultured Bacteroides sp. isolate UMGS219 genome assembly, contig: NODE_205_length_12932_cov_2.64091, whole genome shotgun sequence (12932 bp)
Overview 1 RT 1: 36-5499 bp Neighborhood of RT #1 [36, 5499] COG4646 RVT_N RVT-GII GIIM Feature: gene Location: 36-1052 bp Feature: domain Description: COG4646 Location: 42-669 bp Feature: domain Description: COG4646 Location: 42-669 bp Feature: gene Location: 1711-3378 bp Feature: RT Description: RVT_N Location: 1765-2008 bp Feature: RT Description: RVT_N Location: 1765-2008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2053-2701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2053 -2701 bp Feature: domain Description: GIIM Note: maturase Location: 2755-2986 bp Feature: domain Description: GIIM Note: maturase Location: 2755-2986 bp Feature: gene Location: 3329-4441 bp Feature: gene Location: 5215-5499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: UQFJ01000289.1 uncultured Bacteroides sp. isolate UMGS219 genome assembly, contig: NODE_1694_length_2391_cov_2.22774, whole genome shotgun sequence (2391 bp)
Overview 1 RT 1: 107-2233 bp Neighborhood of RT #1 [107, 2233] RVT_N RVT-GII GIIM Feature: gene Location: 107-1789 bp Feature: RT Description: RVT_N Location: 185-428 bp Feature: RT Description: RVT_N Location: 185-4 28 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 473-1136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 73-1136 bp Feature: domain Description: GIIM Note: maturase Location: 1187-1424 bp Feature: domain Description: GIIM Note: maturase Location: 1187-14 24 bp Feature: gene Location: 1868-1999 bp Feature: gene Location: 2003-2233 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)