myRT

myRT report for GCA_900540715.1_UMGS282

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Seq: UQHD01000015.1 uncultured Parabacteroides sp. isolate UMGS282 genome assembly, contig: NODE_152_length_81028_cov_4.766033, whole genome shotgun sequence (81028 bp)
Overview 1 RT 1: 66514-73117 bp Neighborhood of RT #1 [66514, 73164] Avd_like RVT-DGRs DUF4906 BACON BACON BACON BACON BACON BACON DUF1566 DUF1016_N YhcG_C Feature: gene Location: 66514-67023 bp Feature: gene Location: 67036-67380 bp Feature: domain Description: Avd_like Location: 67066-67369 bp Feature: domain Description: Avd_like Location: 67066-67369 bp Feature: gene Location: 67364-68734 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 67553-68360 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 67553-68360 bp Feature: gene Location: 68738-71977 bp Feature: domain Description: DUF4906 Location: 69200-69791 bp Feature: domain Description: DUF4906 Location: 69200-69791 bp Feature: domain Description: BACON Location: 69851-70127 bp Feature: domain Description: BACON Location: 69851 -701 27 bp Feature: domain Description: BACON Location: 70175-70445 bp Feature: domain Description: BACON Location: 701 75-70445 bp Feature: domain Description: BACON Location: 70478-70694 bp Feature: domain Description: BACON Location: 70478-70694 bp Feature: domain Description: BACON Location: 70769-71045 bp Feature: domain Description: BACON Location: 70769-71 045 bp Feature: domain Description: BACON Location: 71087-71342 bp Feature: domain Description: BACON Location: 71 087-71 342 bp Feature: domain Description: BACON Location: 71390-71579 bp Feature: domain Description: BACON Location: 71 390-71 579 bp Feature: domain Description: DUF1566 Location: 71672-71945 bp Feature: domain Description: DUF1 566 Location: 71 672-71 945 bp Feature: gene Location: 72127-73164 bp Feature: domain Description: DUF1016_N Location: 72184-72592 bp Feature: domain Description: DUF1 01 6_N Location: 721 84-72592 bp Feature: domain Description: YhcG_C Location: 72661-73117 bp Feature: domain Description: YhcG_C Location: 72661 -731 1 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, DUF4906 (pfam16249), BACON (pfam13004), DUF1566 (pfam07603), DUF1016_N (pfam17761), YhcG_C

Seq: UQHD01000055.1 uncultured Parabacteroides sp. isolate UMGS282 genome assembly, contig: NODE_527_length_39450_cov_4.679071, whole genome shotgun sequence (39450 bp)
Overview 1 RT 1: 11650-14858 bp Neighborhood of RT #1 [11650, 14858] PDDEXK_2 RVT-GII GIIM RVT_N Feature: gene Location: 11650-12099 bp Feature: domain Description: PDDEXK_2 Location: 11653-12064 bp Feature: domain Description: PDDEXK_2 Location: 11653-12 064 bp Feature: gene Location: 12223-12432 bp Feature: gene Location: 12682-13509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12685-13285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 685-132 85 bp Feature: domain Description: GIIM Note: maturase Location: 13339-13507 bp Feature: domain Description: GIIM Note: maturase Location: 13339-13507 bp Feature: gene Location: 13521-14036 bp Feature: RT Description: RVT_N Location: 13716-13959 bp Feature: RT Description: RVT_N Location: 13716-13959 bp Feature: gene Location: 14655-14858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT-GII, GIIM (pfam08388), RVT_N (pfam13655)

Seq: UQHD01000078.1 uncultured Parabacteroides sp. isolate UMGS282 genome assembly, contig: NODE_778_length_30050_cov_5.195699, whole genome shotgun sequence (30050 bp)
Overview 1 RT 1: 13968-17112 bp Neighborhood of RT #1 [13968, 17117] DUF4133 RVT_N RVT-GII GIIM DUF4134 Feature: gene Location: 13968-14300 bp Feature: domain Description: DUF4133 Location: 13983-14250 bp Feature: domain Description: DUF413 3 Location: 13 983 -14250 bp Feature: gene Location: 14346-14603 bp Feature: gene Location: 14611-16308 bp Feature: RT Description: RVT_N Location: 14674-14917 bp Feature: RT Description: RVT_N Location: 14674-14917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14962-15622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14962-15622 bp Feature: domain Description: GIIM Note: maturase Location: 15676-15910 bp Feature: domain Description: GIIM Note: maturase Location: 15676-15910 bp Feature: gene Location: 16607-16789 bp Feature: gene Location: 16980-17117 bp Feature: domain Description: DUF4134 Location: 17004-17112 bp Feature: domain Description: DUF413 4 Location: 17004-17112 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4133 (pfam13571), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF4134 (pfam13572)

Seq: UQHD01000134.1 uncultured Parabacteroides sp. isolate UMGS282 genome assembly, contig: NODE_7132_length_4888_cov_4.973515, whole genome shotgun sequence (4888 bp)
Overview 1 RT 1: 230-4334 bp Neighborhood of RT #1 [230, 4348] Peptidase_C11 HU-DNA_bdg Bvu_2165_C_like RVT-DGRs Avd_like Feature: gene Location: 230-1402 bp Feature: domain Description: Peptidase_C11 Location: 341-1112 bp Feature: domain Description: Peptidase_C11 Location: 34 1-1112 bp Feature: gene Location: 1553-2326 bp Feature: domain Description: HU-DNA_bdg Location: 1583-1949 bp Feature: domain Description: HU-DNA_bdg Location: 1583-194 9 bp Feature: domain Description: Bvu_2165_C_like Location: 1973-2279 bp Feature: domain Description: Bvu_2165_C_like Location: 1973-2279 bp Feature: gene Location: 2347-3573 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2533-3310 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2533-3310 bp Feature: gene Location: 3615-3812 bp Feature: gene Location: 4004-4348 bp Feature: domain Description: Avd_like Location: 4028-4334 bp Feature: domain Description: Avd_like Location: 4 028-4 334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HU-DNA_bdg (pfam14848), Bvu_2165_C_like (cl18921), Peptidase_C11 (pfam03415), RVT-DGRs, Avd_like (cd16376)