myRT

myRT report for GCA_900541955.1_UMGS406

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Seq: UQLP01000005.1 uncultured Blautia sp. isolate UMGS406 genome assembly, contig: NODE_92_length_116891_cov_7.47909, whole genome shotgun sequence (116891 bp)
Overview 1 RT 1: 42029-48071 bp Neighborhood of RT #1 [42029, 48071] PRK13759 GGDEF_2 YesN RVT-GII group_II_RT_mat PnbA Feature: gene Location: 42029-43456 bp Feature: domain Description: PRK13759 Location: 42035-43388 bp Feature: domain Description: PRK1 3759 Location: 42035-43388 bp Feature: gene Location: 43475-45463 bp Feature: domain Description: GGDEF_2 Location: 44663-44798 bp Feature: domain Description: GGDEF_2 Location: 44663-44798 bp Feature: domain Description: YesN Location: 44969-45443 bp Feature: domain Description: YesN Location: 44969-45443 bp Feature: gene Location: 45890-46222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45920-46076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45920-46076 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 46112-46217 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 461 1 2-4621 7 bp Feature: gene Location: 46321-47877 bp Feature: domain Description: PnbA Location: 46354-47812 bp Feature: domain Description: PnbA Location: 46354-4781 2 bp Feature: gene Location: 47865-48071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13759 (arylsulfatase; Provisional), GGDEF_2 (pfam17853), YesN (COG4753), RVT-GII, group_II_RT_mat (TIGR04416), PnbA (COG2272)

Seq: UQLP01000015.1 uncultured Blautia sp. isolate UMGS406 genome assembly, contig: NODE_286_length_61950_cov_7.35311, whole genome shotgun sequence (61950 bp)
Overview 1 RT 1: 55721-60712 bp Neighborhood of RT #1 [55721, 60969] AcrR Resolvase Recombinase Zn_ribbon_recom RVT-Retrons UPRTase Feature: gene Location: 55721-56368 bp Feature: domain Description: AcrR Location: 55760-56132 bp Feature: domain Description: AcrR Location: 55760-56132 bp Feature: gene Location: 56729-58297 bp Feature: domain Description: Resolvase Location: 56738-57176 bp Feature: domain Description: Resolvase Location: 56738-57176 bp Feature: domain Description: Recombinase Location: 57242-57563 bp Feature: domain Description: Recombinase Location: 572 42 -57563 bp Feature: domain Description: Zn_ribbon_recom Location: 57611-57776 bp Feature: domain Description: Zn_ribbon_recom Location: 57611-57776 bp Feature: gene Location: 58500-59756 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58956-59508 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58956-59508 bp Feature: gene Location: 59789-60073 bp Feature: gene Location: 60076-60969 bp Feature: domain Description: UPRTase Location: 60496-60712 bp Feature: domain Description: UPRTase Location: 60496-60712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-Retrons, UPRTase (pfam14681)

Seq: UQLP01000025.1 uncultured Blautia sp. isolate UMGS406 genome assembly, contig: NODE_527_length_34405_cov_6.61406, whole genome shotgun sequence (34405 bp)
Overview 1 RT 1: 10397-13911 bp Neighborhood of RT #1 [10397, 13922] YuiF RVT-GII group_II_RT_mat YgaK Feature: gene Location: 10397-11731 bp Feature: domain Description: YuiF Location: 10412-11729 bp Feature: domain Description: YuiF Location: 10412-11729 bp Feature: gene Location: 11807-12064 bp Feature: gene Location: 12264-13046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12615-13035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12615-13 03 5 bp Feature: gene Location: 13070-13549 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 13085-13355 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 13 085-13 3 55 bp Feature: gene Location: 13761-13922 bp Feature: domain Description: YgaK Location: 13764-13911 bp Feature: domain Description: YgaK Location: 13 764-13 911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YuiF (COG2056), RVT-GII, group_II_RT_mat (TIGR04416), YgaK (COG1773)

Seq: UQLP01000045.1 uncultured Blautia sp. isolate UMGS406 genome assembly, contig: NODE_865_length_18169_cov_7.11356, whole genome shotgun sequence (18169 bp)
Overview 1 RT 1: 11730-17161 bp Neighborhood of RT #1 [11730, 17161] DUF3801 VirD4 RVT-GII VirD4 Feature: gene Location: 11730-12293 bp Feature: domain Description: DUF3801 Location: 11913-12273 bp Feature: domain Description: DUF3801 Location: 11913-12273 bp Feature: gene Location: 12290-13093 bp Feature: domain Description: VirD4 Location: 12512-13055 bp Feature: domain Description: VirD4 Location: 12512-13055 bp Feature: gene Location: 13752-15659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14082-14826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 082-14 826 bp Feature: gene Location: 15875-16861 bp Feature: domain Description: VirD4 Location: 15941-16730 bp Feature: domain Description: VirD4 Location: 1594 1-16730 bp Feature: gene Location: 16967-17161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT-GII