myRT

myRT report for GCA_900541965.1_UMGS407

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Seq: UQLN01000015.1 uncultured Parabacteroides sp. isolate UMGS407 genome assembly, contig: NODE_158_length_86297_cov_5.10811, whole genome shotgun sequence (86297 bp)
Overview 1 RT 1: 82030-85639 bp Neighborhood of RT #1 [82030, 85653] TmCorA-like_1 Bac_DNA_binding RVT-DGRs Fib_succ_major Avd_like Feature: gene Location: 82030-83112 bp Feature: domain Description: TmCorA-like_1 Location: 82231-83110 bp Feature: domain Description: TmCorA-like_1 Location: 82231 -831 1 0 bp Feature: gene Location: 83325-83615 bp Feature: domain Description: Bac_DNA_binding Location: 83328-83595 bp Feature: domain Description: Bac_DNA_binding Location: 83328-83595 bp Feature: gene Location: 83682-84884 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 83868-84600 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 83868-84600 bp Feature: gene Location: 84888-85136 bp Feature: domain Description: Fib_succ_major Location: 84921-85098 bp Feature: domain Description: Fib_succ_major Location: 84921 -85098 bp Feature: gene Location: 85309-85653 bp Feature: domain Description: Avd_like Location: 85333-85639 bp Feature: domain Description: Avd_like Location: 85333-85639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TmCorA-like_1 (cd12828), Bac_DNA_binding (pfam00216), RVT-DGRs, Fib_succ_major (TIGR02145), Avd_like (cd16376)

Seq: UQLN01000027.1 uncultured Parabacteroides sp. isolate UMGS407 genome assembly, contig: NODE_241_length_62289_cov_6.04195, whole genome shotgun sequence (62289 bp)
Overview 1 RT 1: 56742-62288 bp Neighborhood of RT #1 [56742, 62288] dnaG RVT-UG24 Feature: gene Location: 56742-57782 bp Feature: domain Description: dnaG Location: 56826-57768 bp Feature: domain Description: dnaG Location: 5682 6-57768 bp Feature: gene Location: 57788-58465 bp Feature: gene Location: 58485-61910 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 58998-59463 bp Feature: RT Description: RVT-UG2 4 Note: UG2 4 RT Location: 58998-59463 bp Feature: gene Location: 62043-62288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaG (TIGR01391), RVT-UG24

Seq: UQLN01000062.1 uncultured Parabacteroides sp. isolate UMGS407 genome assembly, contig: NODE_553_length_25650_cov_5.90334, whole genome shotgun sequence (25650 bp)
Overview 1 RT 1: 1-2621 bp Neighborhood of RT #1 [1, 2938] RVT-GII GIIM NlpE_C Feature: gene Location: 1-1326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 265-883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 265-883 bp Feature: domain Description: GIIM Note: maturase Location: 937-1168 bp Feature: domain Description: GIIM Note: maturase Location: 93 7-1168 bp Feature: gene Location: 1423-2184 bp Feature: gene Location: 2270-2938 bp Feature: domain Description: NlpE_C Location: 2375-2621 bp Feature: domain Description: NlpE_C Location: 23 75-2621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), NlpE_C (pfam17185)

Seq: UQLN01000106.1 uncultured Parabacteroides sp. isolate UMGS407 genome assembly, contig: NODE_2369_length_5168_cov_5.17817, whole genome shotgun sequence (5168 bp)
Overview 1 RT 1: 1479-4593 bp Neighborhood of RT #1 [1479, 4661] Avd_like Fib_succ_major RVT-DGRs HU-HIG Feature: gene Location: 1479-1823 bp Feature: domain Description: Avd_like Location: 1503-1809 bp Feature: domain Description: Avd_like Location: 1503-1809 bp Feature: gene Location: 1933-2247 bp Feature: domain Description: Fib_succ_major Location: 2023-2200 bp Feature: domain Description: Fib_succ_major Location: 2023-2200 bp Feature: gene Location: 2247-3458 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2433-3165 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24 33-3165 bp Feature: gene Location: 3544-4032 bp Feature: gene Location: 4218-4661 bp Feature: domain Description: HU-HIG Location: 4221-4593 bp Feature: domain Description: HU-HIG Location: 4 221-4 593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), Fib_succ_major (TIGR02145), RVT-DGRs, HU-HIG (pfam18291)

Seq: UQLN01000112.1 uncultured Parabacteroides sp. isolate UMGS407 genome assembly, contig: NODE_4504_length_2627_cov_5.30871, whole genome shotgun sequence (2627 bp)
Overview 1 RT 1: 3-2177 bp Neighborhood of RT #1 [3, 2461] Avd_like RVT-DGRs Feature: gene Location: 3-488 bp Feature: gene Location: 485-829 bp Feature: domain Description: Avd_like Location: 509-815 bp Feature: domain Description: Avd_like Location: 5 09-815 bp Feature: gene Location: 1259-2461 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1445-2177 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1445 -2177 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs