myRT

myRT report for GCA_900542415.1_UMGS456

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Seq: UQND01000004.1 uncultured Ruminococcus sp. isolate UMGS456 genome assembly, contig: NODE_30_length_133920_cov_12.062787, whole genome shotgun sequence (133920 bp)
Overview 1 RT 1: 100869-107428 bp Neighborhood of RT #1 [100869, 107553] SIR2 Piwi_piwi-like_ProArk RVT-Retrons TnpV HTH_17 HTH_17 Feature: gene Location: 100869-101006 bp Feature: gene Location: 101066-104110 bp Feature: domain Description: SIR2 Location: 101129-101732 bp Feature: domain Description: SIR2 Location: 1 01 1 29-1 01 732 bp Feature: domain Description: Piwi_piwi-like_ProArk Location: 102767-104063 bp Feature: domain Description: Piwi_piwi-like_ProArk Location: 1 02767-1 04063 bp Feature: gene Location: 104373-106052 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 104496-105096 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 04496-1 05096 bp Feature: gene Location: 106446-106823 bp Feature: domain Description: TnpV Location: 106485-106815 bp Feature: domain Description: TnpV Location: 1 06485-1 0681 5 bp Feature: gene Location: 106966-107553 bp Feature: domain Description: HTH_17 Location: 107032-107167 bp Feature: domain Description: HTH_1 7 Location: 1 07032-1 071 67 bp Feature: domain Description: HTH_17 Location: 107308-107428 bp Feature: domain Description: HTH_1 7 Location: 1 07308-1 07428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2 (pfam02146), Piwi_piwi-like_ProArk (cd04659), RVT-Retrons, TnpV (pfam14198), HTH_17 (pfam12728)