myRT

myRT report for GCA_900542805.1_UMGS500

Download annotations/find similar RTs

Seq: UQOW01000001.1 uncultured Sutterella sp. isolate UMGS500 genome assembly, contig: NODE_31_length_182284_cov_8.415186, whole genome shotgun sequence (182284 bp)
Overview 1 RT 1: 11771-18955 bp Neighborhood of RT #1 [11771, 18955] M20_Acy1_IAAspH RVT-Retrons Feature: gene Location: 11771-11911 bp Feature: gene Location: 12134-13405 bp Feature: domain Description: M20_Acy1_IAAspH Location: 12158-13385 bp Feature: domain Description: M20_Acy1 _IAAspH Location: 1 21 58-1 3385 bp Feature: gene Location: 13884-17321 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16536-17094 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 6536-1 7094 bp Feature: gene Location: 17386-18348 bp Feature: gene Location: 18596-18955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M20_Acy1_IAAspH (cd05665), RVT-Retrons

Seq: UQOW01000006.1 uncultured Sutterella sp. isolate UMGS500 genome assembly, contig: NODE_236_length_80249_cov_7.018268, whole genome shotgun sequence (80249 bp)
Overview 1 RT 1: 77092-79543 bp Neighborhood of RT #1 [77092, 79785] COG3950 RVT-Retrons Feature: gene Location: 77092-77244 bp Feature: gene Location: 77391-78845 bp Feature: domain Description: COG3950 Location: 77520-78774 bp Feature: domain Description: COG3950 Location: 7752 0-78774 bp Feature: gene Location: 78838-79785 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 78940-79543 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 78940-79543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons

Seq: UQOW01000011.1 uncultured Sutterella sp. isolate UMGS500 genome assembly, contig: NODE_461_length_56665_cov_8.267356, whole genome shotgun sequence (56665 bp)
Overview 1 RT 1: 44718-49120 bp Neighborhood of RT #1 [44718, 49203] glmM InsQ RVT-GII InsQ Feature: gene Location: 44718-46052 bp Feature: domain Description: glmM Location: 44727-46047 bp Feature: domain Description: glmM Location: 44727-46047 bp Feature: gene Location: 46158-46880 bp Feature: domain Description: InsQ Location: 46170-46794 bp Feature: domain Description: InsQ Location: 46170-46794 bp Feature: gene Location: 47086-48393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47362-48025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 473 62-48025 bp Feature: gene Location: 48523-48765 bp Feature: gene Location: 48769-49203 bp Feature: domain Description: InsQ Location: 48814-49120 bp Feature: domain Description: InsQ Location: 48814-49120 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT glmM (TIGR01455), InsQ (COG0675), RVT-GII