myRT

myRT report for GCA_900543075.1_UMGS531

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Seq: UQQB01000008.1 uncultured Mollicutes bacterium isolate UMGS531 genome assembly, contig: NODE_194_length_72057_cov_32.453085, whole genome shotgun sequence (72057 bp)
Overview 1 RT 1: 22203-29625 bp Neighborhood of RT #1 [22203, 29633] VRR_NUC N6_Mtase N6_Mtase Methylase_S Methylase_S RVT-Retrons HTH_36 SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 Feature: gene Location: 22203-24206 bp Feature: domain Description: VRR_NUC Location: 22275-22437 bp Feature: domain Description: VRR_NUC Location: 22275-22437 bp Feature: domain Description: N6_Mtase Location: 23271-23658 bp Feature: domain Description: N6_Mtase Location: 23271 -23658 bp Feature: domain Description: N6_Mtase Location: 23673-24069 bp Feature: domain Description: N6_Mtase Location: 23673-24069 bp Feature: gene Location: 24223-25353 bp Feature: domain Description: Methylase_S Location: 24229-24715 bp Feature: domain Description: Methylase_S Location: 24229-2471 5 bp Feature: domain Description: Methylase_S Location: 24829-25267 bp Feature: domain Description: Methylase_S Location: 24829-25267 bp Feature: gene Location: 25943-27178 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26153-26750 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 261 53-26750 bp Feature: gene Location: 27331-27837 bp Feature: domain Description: HTH_36 Location: 27388-27550 bp Feature: domain Description: HTH_36 Location: 27388-27550 bp Feature: gene Location: 28059-29633 bp Feature: domain Description: SR_TndX_transposase Location: 28107-28533 bp Feature: domain Description: SR_TndX_transposase Location: 281 07-28533 bp Feature: domain Description: Recombinase Location: 28635-28986 bp Feature: domain Description: Recombinase Location: 28635-28986 bp Feature: domain Description: Zn_ribbon_recom Location: 29025-29205 bp Feature: domain Description: Zn_ribbon_recom Location: 29025-29205 bp Feature: domain Description: DUF4368 Location: 29484-29625 bp Feature: domain Description: DUF4368 Location: 29484-29625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VRR_NUC (smart00990), N6_Mtase (pfam02384), Methylase_S (pfam01420), RVT-Retrons, HTH_36 (pfam13730), SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287)

Seq: UQQB01000018.1 uncultured Mollicutes bacterium isolate UMGS531 genome assembly, contig: NODE_1578_length_20719_cov_34.060492, whole genome shotgun sequence (20719 bp)
Overview 1 RT 1: 84-3824 bp Neighborhood of RT #1 [84, 3824] RVT-DGRs Avd_like Feature: gene Location: 84-1334 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 261-987 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 61-987 bp Feature: gene Location: 1348-1692 bp Feature: domain Description: Avd_like Location: 1369-1678 bp Feature: domain Description: Avd_like Location: 1369-1678 bp Feature: gene Location: 2175-3824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)