myRT

myRT report for GCA_900543115.1_UMGS529

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Seq: UQQE01000014.1 uncultured Lachnospiraceae bacterium isolate UMGS529 genome assembly, contig: NODE_363_length_56929_cov_6.167827, whole genome shotgun sequence (56929 bp)
Overview 1 RT 1: 2125-8056 bp Neighborhood of RT #1 [2125, 8076] VirD4 RVT-GII DUF3801 Feature: gene Location: 2125-3870 bp Feature: domain Description: VirD4 Location: 2377-3772 bp Feature: domain Description: VirD4 Location: 2377-3772 bp Feature: gene Location: 3912-4259 bp Feature: gene Location: 4328-6145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4649-5348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4649-5348 bp Feature: gene Location: 6829-7593 bp Feature: gene Location: 7603-8076 bp Feature: domain Description: DUF3801 Location: 7717-8056 bp Feature: domain Description: DUF3801 Location: 771 7-8056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), RVT-GII, DUF3801 (pfam12687)

Seq: UQQE01000026.1 uncultured Lachnospiraceae bacterium isolate UMGS529 genome assembly, contig: NODE_544_length_39984_cov_5.394325, whole genome shotgun sequence (39984 bp)
Overview 1 RT 1: 7018-16107 bp Neighborhood of RT #1 [7018, 16118] AAA_21 AE_Prim_S_like RVT-UG10 AAA-ATPase_like PDDEXK_9 Feature: gene Location: 7018-8181 bp Feature: domain Description: AAA_21 Location: 7174-8014 bp Feature: domain Description: AAA_2 1 Location: 7174-8014 bp Feature: gene Location: 8162-8821 bp Feature: gene Location: 8963-11491 bp Feature: domain Description: AE_Prim_S_like Location: 9131-9326 bp Feature: domain Description: AE_Prim_S_like Location: 9131-932 6 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 10322-10931 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 1032 2 -10931 bp Feature: gene Location: 11478-14255 bp Feature: gene Location: 14379-16118 bp Feature: domain Description: AAA-ATPase_like Location: 14436-15333 bp Feature: domain Description: AAA-ATPase_like Location: 14436-15333 bp Feature: domain Description: PDDEXK_9 Location: 15816-16107 bp Feature: domain Description: PDDEXK_9 Location: 15816-16107 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), AE_Prim_S_like (cl01287), RVT-UG10, AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011)