myRT

myRT report for GCA_900543675.1_UMGS592

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Seq: UQRY01000003.1 uncultured Tenericutes bacterium isolate UMGS592 genome assembly, contig: NODE_154_length_80625_cov_13.359427, whole genome shotgun sequence (80625 bp)
Overview 1 RT 1: 17151-21338 bp Neighborhood of RT #1 [17151, 21338] sigpep_I_arch ksgA RVT-GII RVT-GII GIIM Feature: gene Location: 17151-17771 bp Feature: domain Description: sigpep_I_arch Location: 17172-17685 bp Feature: domain Description: sigpep_I_arch Location: 1 71 72-1 7685 bp Feature: gene Location: 17836-18627 bp Feature: domain Description: ksgA Location: 17842-18622 bp Feature: domain Description: ksgA Location: 1 7842-1 8622 bp Feature: gene Location: 19164-19787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19401-19764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9401 -1 9764 bp Feature: gene Location: 19792-20457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19795-20002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9795-20002 bp Feature: domain Description: GIIM Note: maturase Location: 20059-20260 bp Feature: domain Description: GIIM Note: maturase Location: 20059-20260 bp Feature: gene Location: 20716-20913 bp Feature: gene Location: 21138-21338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sigpep_I_arch (TIGR02228), ksgA (TIGR00755), RVT-GII, GIIM (pfam08388)

Seq: UQRY01000027.1 uncultured Tenericutes bacterium isolate UMGS592 genome assembly, contig: NODE_1242_length_23999_cov_10.913005, whole genome shotgun sequence (23999 bp)
Overview 1 RT 1: 4836-7605 bp Neighborhood of RT #1 [4836, 7631] MutS_I Avd_like RVT-DGRs RVT-DGRs Def YjcZ_2 Feature: gene Location: 4836-5243 bp Feature: domain Description: MutS_I Location: 4851-5028 bp Feature: domain Description: MutS_I Location: 4851-502 8 bp Feature: gene Location: 5233-5580 bp Feature: domain Description: Avd_like Location: 5254-5566 bp Feature: domain Description: Avd_like Location: 52 54-5566 bp Feature: gene Location: 5567-5947 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5765-5933 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5765-5933 bp Feature: gene Location: 6049-6690 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6055-6595 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6055-6595 bp Feature: gene Location: 6701-7246 bp Feature: domain Description: Def Location: 6713-7217 bp Feature: domain Description: Def Location: 6713-72 17 bp Feature: gene Location: 7353-7631 bp Feature: domain Description: YjcZ_2 Location: 7566-7605 bp Feature: domain Description: YjcZ_2 Location: 7566-7605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MutS_I (pfam01624), Avd_like (cd16376), RVT-DGRs, Def (COG0242), YjcZ_2