myRT

myRT report for GCA_900543995.1_UMGS632

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Seq: UQTS01000008.1 uncultured Clostridium sp. isolate UMGS632 genome assembly, contig: NODE_242_length_60946_cov_17.7003, whole genome shotgun sequence (60946 bp)
Overview 1 RT 1: 22329-27953 bp Neighborhood of RT #1 [22329, 28036] lysW lysW topB RVT-GII Intron_maturas2 HNHc PRK07726 Ssb Feature: gene Location: 22329-22538 bp Feature: domain Description: lysW Location: 22380-22464 bp Feature: domain Description: lysW Location: 22380-22464 bp Feature: domain Description: lysW Location: 22485-22533 bp Feature: domain Description: lysW Location: 22485-22533 bp Feature: gene Location: 22797-23693 bp Feature: domain Description: topB Location: 22803-23481 bp Feature: domain Description: topB Location: 22803-23481 bp Feature: gene Location: 23915-25714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24218-24911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2421 8-2491 1 bp Feature: domain Description: Intron_maturas2 Location: 24998-25202 bp Feature: domain Description: Intron_maturas2 Location: 24998-25202 bp Feature: domain Description: HNHc Note: nucleases Location: 25448-25601 bp Feature: domain Description: HNHc Note: nucleases Location: 25448-25601 bp Feature: gene Location: 26414-27568 bp Feature: domain Description: PRK07726 Location: 26420-27533 bp Feature: domain Description: PRK07726 Location: 26420-27533 bp Feature: gene Location: 27608-28036 bp Feature: domain Description: Ssb Location: 27611-27953 bp Feature: domain Description: Ssb Location: 2761 1 -27953 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lysW (TIGR01206), topB (TIGR01056), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK07726 (DNA topoisomerase 3), Ssb (COG0629)

Seq: UQTS01000015.1 uncultured Clostridium sp. isolate UMGS632 genome assembly, contig: NODE_385_length_43983_cov_14.6069, whole genome shotgun sequence (43983 bp)
Overview 1 RT 1: 18268-32637 bp Neighborhood of RT #1 [18268, 32642] GyrB RVT-GII HNHc parE_Gpos PRK13979 GATase1_DJ-1 recJ RVT-GII HNHc recJ CwlO1 Spr Feature: gene Location: 18268-19848 bp Feature: domain Description: GyrB Location: 18280-19837 bp Feature: domain Description: GyrB Location: 182 80-19837 bp Feature: gene Location: 20236-20379 bp Feature: gene Location: 20616-22526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20940-21678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0940-2 1678 bp Feature: domain Description: HNHc Note: nucleases Location: 22260-22395 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 2 60-2 2 395 bp Feature: gene Location: 22628-22993 bp Feature: domain Description: parE_Gpos Location: 22631-22985 bp Feature: domain Description: parE_Gpos Location: 2 2 631-2 2 985 bp Feature: gene Location: 23017-25911 bp Feature: domain Description: PRK13979 Location: 23026-25900 bp Feature: domain Description: PRK13979 Location: 2 302 6-2 5900 bp Feature: gene Location: 26040-26576 bp Feature: domain Description: GATase1_DJ-1 Location: 26049-26526 bp Feature: domain Description: GATase1_DJ-1 Location: 2 6049-2 652 6 bp Feature: gene Location: 26689-26964 bp Feature: domain Description: recJ Location: 26758-26947 bp Feature: domain Description: recJ Location: 2 6758-2 6947 bp Feature: gene Location: 27726-29600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28044-28782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8044-2 8782 bp Feature: domain Description: HNHc Note: nucleases Location: 29346-29484 bp Feature: domain Description: HNHc Note: nucleases Location: 2 9346-2 9484 bp Feature: gene Location: 29760-31235 bp Feature: domain Description: recJ Location: 29772-31221 bp Feature: domain Description: recJ Location: 2 9772 -312 2 1 bp Feature: gene Location: 31389-32642 bp Feature: domain Description: CwlO1 Location: 31404-32043 bp Feature: domain Description: CwlO1 Location: 31404-32 043 bp Feature: domain Description: Spr Location: 32205-32637 bp Feature: domain Description: Spr Location: 32 2 05-32 637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GyrB (COG0187), RVT-GII, HNHc (smart00507), parE_Gpos (TIGR01058), PRK13979 (DNA topoisomerase IV subunit A; Provisional), GATase1_DJ-1 (cd03135), recJ (TIGR00644), CwlO1 (COG3883), Spr (COG0791)