myRT

myRT report for GCA_900544005.1_UMGS636

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Seq: UQUB01000001.1 uncultured Mollicutes bacterium isolate UMGS636 genome assembly, contig: NODE_44_length_128886_cov_11.242480, whole genome shotgun sequence (128886 bp)
Overview 1 RT 1: 113739-117867 bp Neighborhood of RT #1 [113739, 117867] RVT-GII GIIM PinE Feature: gene Location: 113739-113984 bp Feature: gene Location: 114079-114783 bp Feature: gene Location: 114879-116129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115125-115782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 51 25-1 1 5782 bp Feature: domain Description: GIIM Note: maturase Location: 115860-115974 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 5860-1 1 5974 bp Feature: gene Location: 116499-117143 bp Feature: domain Description: PinE Location: 116553-117003 bp Feature: domain Description: PinE Location: 1 1 6553-1 1 7003 bp Feature: gene Location: 117463-117867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PinE (COG1961)

Seq: UQUB01000010.1 uncultured Mollicutes bacterium isolate UMGS636 genome assembly, contig: NODE_689_length_38207_cov_15.023459, whole genome shotgun sequence (38207 bp)
Overview 1 RT 1: 32255-35754 bp Neighborhood of RT #1 [32255, 35837] PRK14127 obgE RVT-DGRs Avd_like MutS_I Feature: gene Location: 32255-32581 bp Feature: domain Description: PRK14127 Location: 32270-32570 bp Feature: domain Description: PRK1412 7 Location: 32 2 70-32 570 bp Feature: gene Location: 32719-33987 bp Feature: domain Description: obgE Location: 32722-33982 bp Feature: domain Description: obgE Location: 32 72 2 -33982 bp Feature: gene Location: 34119-35093 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 34278-34950 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 342 78-34950 bp Feature: gene Location: 35129-35485 bp Feature: domain Description: Avd_like Location: 35156-35474 bp Feature: domain Description: Avd_like Location: 35156-35474 bp Feature: gene Location: 35478-35837 bp Feature: domain Description: MutS_I Location: 35484-35754 bp Feature: domain Description: MutS_I Location: 35484-35754 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14127 (cell division regulator GpsB), obgE (PRK12299), RVT-DGRs, Avd_like (cd16376), MutS_I (pfam01624)

Seq: UQUB01000018.1 uncultured Mollicutes bacterium isolate UMGS636 genome assembly, contig: NODE_1425_length_24522_cov_10.296971, whole genome shotgun sequence (24522 bp)
Overview 1 RT 1: 21426-23823 bp Neighborhood of RT #1 [21426, 24083] COG3910 RVT-Retrons Feature: gene Location: 21426-21776 bp Feature: gene Location: 22007-22915 bp Feature: domain Description: COG3910 Location: 22142-22895 bp Feature: domain Description: COG3 910 Location: 22142-22895 bp Feature: gene Location: 23124-24083 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23268-23823 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23 268-23 823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3910 (Predicted ATPase ), RVT-Retrons