myRT

myRT report for GCA_900544035.1_UMGS635

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Seq: UQTP01000001.1 uncultured Tenericutes bacterium isolate UMGS635 genome assembly, contig: NODE_7_length_217494_cov_22.315357, whole genome shotgun sequence (217494 bp)
Overview 1 RT 1: 4129-8597 bp Neighborhood of RT #1 [4129, 8608] CofD_related RVT-Retrons spore_IV_B PLN02240 Feature: gene Location: 4129-4338 bp Feature: gene Location: 4401-5354 bp Feature: domain Description: CofD_related Location: 4413-5325 bp Feature: domain Description: CofD_related Location: 441 3-5325 bp Feature: gene Location: 5371-6342 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5536-6094 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5536-6094 bp Feature: gene Location: 6600-7580 bp Feature: domain Description: spore_IV_B Location: 6675-7569 bp Feature: domain Description: spore_IV_B Location: 6675-7569 bp Feature: gene Location: 7598-8608 bp Feature: domain Description: PLN02240 Location: 7604-8597 bp Feature: domain Description: PLN02240 Location: 7604-8597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CofD_related (TIGR01826), RVT-Retrons, spore_IV_B (TIGR02860), PLN02240 (UDP-glucose 4-epimerase)

Seq: UQTP01000006.1 uncultured Tenericutes bacterium isolate UMGS635 genome assembly, contig: NODE_149_length_72561_cov_22.274488, whole genome shotgun sequence (72561 bp)
Overview 1 RT 1: 5854-10879 bp Neighborhood of RT #1 [5854, 10896] MutS_I RVT-DGRs Yae1_N T_den_put_tspse Feature: gene Location: 5854-7275 bp Feature: gene Location: 7678-8058 bp Feature: domain Description: MutS_I Location: 7687-7873 bp Feature: domain Description: MutS_I Location: 7687-7873 bp Feature: gene Location: 8386-9450 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8572-9244 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8572 -92 44 bp Feature: gene Location: 9707-9991 bp Feature: domain Description: Yae1_N Location: 9803-9854 bp Feature: domain Description: Yae1_N Location: 9803-9854 bp Feature: gene Location: 10003-10896 bp Feature: domain Description: T_den_put_tspse Location: 10039-10879 bp Feature: domain Description: T_den_put_tspse Location: 10039-10879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MutS_I (pfam01624), RVT-DGRs, Yae1_N (pfam09811), T_den_put_tspse (TIGR01784)

Seq: UQTP01000007.1 uncultured Tenericutes bacterium isolate UMGS635 genome assembly, contig: NODE_174_length_67853_cov_27.729137, whole genome shotgun sequence (67853 bp)
Overview 1 RT 1: 60916-63667 bp Neighborhood of RT #1 [60916, 63675] RVT-DGRs Phage_tail_APC MA Feature: gene Location: 60916-61176 bp Feature: gene Location: 61304-61579 bp Feature: gene Location: 61837-62907 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 62053-62647 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 62053 -62647 bp Feature: gene Location: 63095-63373 bp Feature: domain Description: Phage_tail_APC Location: 63101-63344 bp Feature: domain Description: Phage_tail_APC Location: 63 101-63 3 44 bp Feature: gene Location: 63376-63675 bp Feature: domain Description: MA Location: 63448-63667 bp Feature: domain Description: MA Location: 63 448-63 667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_tail_APC (pfam16778), MA (smart00283)

Seq: UQTP01000015.1 uncultured Tenericutes bacterium isolate UMGS635 genome assembly, contig: NODE_720_length_34014_cov_22.026296, whole genome shotgun sequence (34014 bp)
Overview 1 RT 1: 1480-4565 bp Neighborhood of RT #1 [1480, 4565] Avd_like RVT-DGRs MutS_I Feature: gene Location: 1480-1656 bp Feature: gene Location: 2250-2609 bp Feature: domain Description: Avd_like Location: 2280-2595 bp Feature: domain Description: Avd_like Location: 2280-2595 bp Feature: gene Location: 2711-3598 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2807-3413 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2807-34 13 bp Feature: gene Location: 3620-3961 bp Feature: domain Description: MutS_I Location: 3635-3875 bp Feature: domain Description: MutS_I Location: 3635-3875 bp Feature: gene Location: 4323-4565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, MutS_I (pfam01624)