myRT

myRT report for GCA_900544435.1_UMGS673

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Seq: UQVG01000014.1 uncultured Erysipelotrichaceae bacterium isolate UMGS673 genome assembly, contig: NODE_1006_length_16786_cov_4.514195, whole genome shotgun sequence (16786 bp)
Overview 1 RT 1: 8675-14573 bp Neighborhood of RT #1 [8675, 14620] RVT-GII COG0610 Feature: gene Location: 8675-8995 bp Feature: gene Location: 9125-9307 bp Feature: gene Location: 9324-9713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9525-9693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9525-9693 bp Feature: gene Location: 10464-11075 bp Feature: gene Location: 11480-14620 bp Feature: domain Description: COG0610 Location: 11498-14573 bp Feature: domain Description: COG061 0 Location: 1 1 498-1 4573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-GII

Seq: UQVG01000052.1 uncultured Erysipelotrichaceae bacterium isolate UMGS673 genome assembly, contig: NODE_1750_length_10650_cov_5.106937, whole genome shotgun sequence (10650 bp)
Overview 1 RT 1: 1812-8917 bp Neighborhood of RT #1 [1812, 8988] RVT-Retrons YbjD DEXQc_UvrD UvrD Feature: gene Location: 1812-2924 bp Feature: gene Location: 2993-3859 bp Feature: gene Location: 4015-4974 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4153-4708 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4153-4708 bp Feature: gene Location: 5016-7025 bp Feature: domain Description: YbjD Location: 5130-6999 bp Feature: domain Description: YbjD Location: 5130-6999 bp Feature: gene Location: 7018-8988 bp Feature: domain Description: DEXQc_UvrD Location: 7111-7939 bp Feature: domain Description: DEXQc_UvrD Location: 7111-7939 bp Feature: domain Description: UvrD Location: 8695-8917 bp Feature: domain Description: UvrD Location: 8695-8917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, YbjD (COG3593), DEXQc_UvrD (cd17932), UvrD (COG0210)

Seq: UQVG01000062.1 uncultured Erysipelotrichaceae bacterium isolate UMGS673 genome assembly, contig: NODE_1899_length_9990_cov_3.842778, whole genome shotgun sequence (9990 bp)
Overview 1 RT 1: 6693-9846 bp Neighborhood of RT #1 [6693, 9989] MntP ECM27 RVT-GII GIIM Feature: gene Location: 6693-7262 bp Feature: domain Description: MntP Location: 6705-7251 bp Feature: domain Description: MntP Location: 6705-7251 bp Feature: gene Location: 7276-8220 bp Feature: domain Description: ECM27 Location: 7288-8215 bp Feature: domain Description: ECM27 Location: 7288-8215 bp Feature: gene Location: 8736-9989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8940-9555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8940-9555 bp Feature: domain Description: GIIM Note: maturase Location: 9615-9846 bp Feature: domain Description: GIIM Note: maturase Location: 9615-9846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MntP (COG1971), ECM27 (COG0530), RVT-GII, GIIM (pfam08388)