myRT

myRT report for GCA_900544505.1_UMGS681

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Seq: UQVM01000046.1 uncultured Clostridium sp. isolate UMGS681 genome assembly, contig: NODE_1562_length_21975_cov_11.471122, whole genome shotgun sequence (21975 bp)
Overview 1 RT 1: 3892-10491 bp Neighborhood of RT #1 [3892, 10496] DUF4145 RVT-UG3 RVT-UG8 DUF2971 IS285 Feature: gene Location: 3892-4389 bp Feature: domain Description: DUF4145 Location: 3964-4231 bp Feature: domain Description: DUF41 45 Location: 3964-4231 bp Feature: gene Location: 4394-4999 bp Feature: gene Location: 5025-6353 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 5325-5790 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 5325-5790 bp Feature: gene Location: 6488-8536 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 7019-7460 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 701 9-7460 bp Feature: gene Location: 8552-9493 bp Feature: domain Description: DUF2971 Location: 9011-9296 bp Feature: domain Description: DUF2971 Location: 901 1 -9296 bp Feature: gene Location: 10215-10496 bp Feature: domain Description: IS285 Location: 10221-10491 bp Feature: domain Description: IS285 Location: 1 0221 -1 0491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4145 (pfam13643), RVT-UG3, RVT-UG8, DUF2971 (pfam11185), IS285 (COG3328)

Seq: UQVM01000047.1 uncultured Clostridium sp. isolate UMGS681 genome assembly, contig: NODE_1612_length_21507_cov_11.513891, whole genome shotgun sequence (21507 bp)
Overview 1 RT 1: 6797-15246 bp Neighborhood of RT #1 [6797, 15266] DDE_Tnp_1 AE_Prim_S_like RVT-UG10 AAA-ATPase_like PDDEXK_9 Feature: gene Location: 6797-6928 bp Feature: gene Location: 7096-8085 bp Feature: domain Description: DDE_Tnp_1 Location: 7495-7888 bp Feature: domain Description: DDE_Tnp_1 Location: 7495-7888 bp Feature: gene Location: 8224-10815 bp Feature: domain Description: AE_Prim_S_like Location: 8347-8779 bp Feature: domain Description: AE_Prim_S_like Location: 8347-8779 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 9610-10249 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 9610-102 49 bp Feature: gene Location: 10793-13414 bp Feature: gene Location: 13596-15266 bp Feature: domain Description: AAA-ATPase_like Location: 13617-14484 bp Feature: domain Description: AAA-ATPase_like Location: 13617-14484 bp Feature: domain Description: PDDEXK_9 Location: 14949-15246 bp Feature: domain Description: PDDEXK_9 Location: 14949-152 46 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), AE_Prim_S_like (cl01287), RVT-UG10, AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011)

Seq: UQVM01000055.1 uncultured Clostridium sp. isolate UMGS681 genome assembly, contig: NODE_2152_length_17351_cov_6.406684, whole genome shotgun sequence (17351 bp)
Overview 1 RT 1: 2845-10396 bp Neighborhood of RT #1 [2845, 10968] Cas_Cas1 RVT-CRISPR COG4951 Cas_DxTHG Cas10_III Feature: gene Location: 2845-3819 bp Feature: domain Description: Cas_Cas1 Location: 2857-3703 bp Feature: domain Description: Cas_Cas1 Location: 2857-3 703 bp Feature: gene Location: 3968-4108 bp Feature: gene Location: 4290-7214 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4593-5196 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4593 -5196 bp Feature: domain Description: COG4951 Location: 5766-6540 bp Feature: domain Description: COG4951 Location: 5766-6540 bp Feature: gene Location: 7567-9300 bp Feature: domain Description: Cas_DxTHG Location: 7666-8539 bp Feature: domain Description: Cas_DxTHG Location: 7666-853 9 bp Feature: gene Location: 9322-10968 bp Feature: domain Description: Cas10_III Location: 9772-10396 bp Feature: domain Description: Cas10_III Location: 9772-103 96 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cas1 (pfam01867), RVT-CRISPR, COG4951 (Uncharacterized protein ), Cas_DxTHG (pfam09455), Cas10_III (cl21742)

Seq: UQVM01000114.1 uncultured Clostridium sp. isolate UMGS681 genome assembly, contig: NODE_13897_length_3807_cov_8.388593, whole genome shotgun sequence (3807 bp)
Overview 1 RT 1: 2292-3581 bp Neighborhood of RT #1 [2292, 3751] RVT-GII GIIM Feature: gene Location: 2292-2474 bp Feature: gene Location: 2487-2657 bp Feature: gene Location: 2930-3751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2933-3293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2933-3293 bp Feature: domain Description: GIIM Note: maturase Location: 3353-3581 bp Feature: domain Description: GIIM Note: maturase Location: 3353-3581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: UQVM01000139.1 uncultured Clostridium sp. isolate UMGS681 genome assembly, contig: NODE_18793_length_2866_cov_7.360014, whole genome shotgun sequence (2866 bp)
Overview 1 RT 1: 3-2865 bp Neighborhood of RT #1 [3, 2865] RVT-GII GIIM Feature: gene Location: 3-344 bp Feature: gene Location: 424-1746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 643-1261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 643-1261 bp Feature: domain Description: GIIM Note: maturase Location: 1324-1525 bp Feature: domain Description: GIIM Note: maturase Location: 1324-15 25 bp Feature: gene Location: 2233-2865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)