myRT

myRT report for GCA_900544665.1_UMGS695

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Seq: UQWB01000013.1 uncultured Solobacterium sp. isolate UMGS695 genome assembly, contig: NODE_502_length_26443_cov_6.351334, whole genome shotgun sequence (26443 bp)
Overview 1 RT 1: 228-3915 bp Neighborhood of RT #1 [228, 3915] RVT-GII GIIM CstA PRK15015 Feature: gene Location: 228-1508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 444-1059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 444-1 059 bp Feature: domain Description: GIIM Note: maturase Location: 1122-1335 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 22-1 335 bp Feature: gene Location: 1791-3527 bp Feature: domain Description: CstA Location: 1794-2853 bp Feature: domain Description: CstA Location: 1 794-2853 bp Feature: domain Description: PRK15015 Location: 2997-3333 bp Feature: domain Description: PRK1 501 5 Location: 2997-3333 bp Feature: gene Location: 3748-3915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CstA (pfam02554), PRK15015 (carbon starvation protein CstA), RVT-GII, GIIM (pfam08388)

Seq: UQWB01000028.1 uncultured Solobacterium sp. isolate UMGS695 genome assembly, contig: NODE_756_length_19260_cov_4.916220, whole genome shotgun sequence (19260 bp)
Overview 1 RT 1: 4591-9527 bp Neighborhood of RT #1 [4591, 9547] Relaxase RVT-GII Intron_maturas2 Sortase_B Feature: gene Location: 4591-4995 bp Feature: domain Description: Relaxase Location: 4642-4948 bp Feature: domain Description: Relaxase Location: 4642 -4948 bp Feature: gene Location: 5348-5491 bp Feature: gene Location: 5498-7315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5762-6584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5762 -6584 bp Feature: domain Description: Intron_maturas2 Location: 6659-6962 bp Feature: domain Description: Intron_maturas2 Location: 6659-6962 bp Feature: gene Location: 7457-8782 bp Feature: gene Location: 8786-9547 bp Feature: domain Description: Sortase_B Location: 8993-9527 bp Feature: domain Description: Sortase_B Location: 8993-952 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), RVT-GII, Intron_maturas2 (pfam01348), Sortase_B (cd05826)

Seq: UQWB01000081.1 uncultured Solobacterium sp. isolate UMGS695 genome assembly, contig: NODE_1469_length_11618_cov_4.649572, whole genome shotgun sequence (11618 bp)
Overview 1 RT 1: 9588-11236 bp Neighborhood of RT #1 [9588, 11616] COG2510 COG2510 RVT-GII Feature: gene Location: 9588-10073 bp Feature: domain Description: COG2510 Location: 9657-10068 bp Feature: domain Description: COG2510 Location: 9657-10068 bp Feature: gene Location: 10094-10303 bp Feature: domain Description: COG2510 Location: 10100-10289 bp Feature: domain Description: COG2510 Location: 10100-10289 bp Feature: gene Location: 10534-11616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10573-11236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10573 -1123 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2510 (Uncharacterized membrane protein ), RVT-GII

Seq: UQWB01000120.1 uncultured Solobacterium sp. isolate UMGS695 genome assembly, contig: NODE_2387_length_7628_cov_6.483956, whole genome shotgun sequence (7628 bp)
Overview 1 RT 1: 3930-7189 bp Neighborhood of RT #1 [3930, 7407] PRK09243 cysteine_hydrolases RVT-GII GIIM Feature: gene Location: 3930-5375 bp Feature: domain Description: PRK09243 Location: 3939-5337 bp Feature: domain Description: PRK0924 3 Location: 3939-5337 bp Feature: gene Location: 5386-5997 bp Feature: domain Description: cysteine_hydrolases Location: 5452-5920 bp Feature: domain Description: cysteine_hydrolases Location: 54 52-5920 bp Feature: gene Location: 6109-7407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6310-6928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6310-6928 bp Feature: domain Description: GIIM Note: maturase Location: 6982-7189 bp Feature: domain Description: GIIM Note: maturase Location: 6982-7189 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09243 (nicotinate phosphoribosyltransferase; Validated), cysteine_hydrolases (cl00220), RVT-GII, GIIM (pfam08388)

Seq: UQWB01000192.1 uncultured Solobacterium sp. isolate UMGS695 genome assembly, contig: NODE_3899_length_4909_cov_3.430573, whole genome shotgun sequence (4909 bp)
Overview 1 RT 1: 636-4235 bp Neighborhood of RT #1 [636, 4235] HTH_XRE RVT-Retrons Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 636-866 bp Feature: gene Location: 894-1199 bp Feature: domain Description: HTH_XRE Location: 906-1068 bp Feature: domain Description: HTH_XRE Location: 906-1068 bp Feature: gene Location: 1427-2056 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1433-1877 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1433-1877 bp Feature: gene Location: 2605-3831 bp Feature: domain Description: Arm-DNA-bind_5 Location: 2635-2884 bp Feature: domain Description: Arm-DNA-bind_5 Location: 2635 -2884 bp Feature: domain Description: Phage_int_SAM_5 Location: 2932-3238 bp Feature: domain Description: Phage_int_SAM_5 Location: 2932-3238 bp Feature: domain Description: INTN1_C_like Location: 3289-3778 bp Feature: domain Description: INTN1_C_like Location: 3289-3778 bp Feature: gene Location: 3954-4235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), HTH_XRE (smart00530)