myRT

myRT report for GCA_900545585.1_UMGS792

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Seq: UQZR01000001.1 uncultured Clostridiales bacterium isolate UMGS792 genome assembly, contig: NODE_33_length_162773_cov_8.912764, whole genome shotgun sequence (162773 bp)
Overview 1 RT 1: 102888-107979 bp Neighborhood of RT #1 [102888, 107996] spore_cwlD RVT-GII CotJC CotJA CotJB Feature: gene Location: 102888-103667 bp Feature: domain Description: spore_cwlD Location: 103077-103644 bp Feature: domain Description: spore_cwlD Location: 1 03077-1 03644 bp Feature: gene Location: 103790-103921 bp Feature: gene Location: 104121-105980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104379-105093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 04379-1 05093 bp Feature: gene Location: 106954-107550 bp Feature: domain Description: CotJC Location: 106957-107524 bp Feature: domain Description: CotJC Location: 1 06957-1 07524 bp Feature: gene Location: 107550-107996 bp Feature: domain Description: CotJA Location: 107628-107721 bp Feature: domain Description: CotJA Location: 1 07628-1 07721 bp Feature: domain Description: CotJB Location: 107760-107979 bp Feature: domain Description: CotJB Location: 1 07760-1 07979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT spore_cwlD (TIGR02883), RVT-GII, CotJC (COG3546), CotJA (pfam11007), CotJB (pfam12652)

Seq: UQZR01000019.1 uncultured Clostridiales bacterium isolate UMGS792 genome assembly, contig: NODE_328_length_51333_cov_12.138676, whole genome shotgun sequence (51333 bp)
Overview 1 RT 1: 44123-48189 bp Neighborhood of RT #1 [44123, 48206] RVT-Retrons PhdYeFM_antitox Doc Feature: gene Location: 44123-44305 bp Feature: gene Location: 44677-46038 bp Feature: gene Location: 46365-47429 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46593-47148 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46593-47148 bp Feature: gene Location: 47581-47823 bp Feature: domain Description: PhdYeFM_antitox Location: 47602-47722 bp Feature: domain Description: PhdYeFM_antitox Location: 47602 -4772 2 bp Feature: gene Location: 47820-48206 bp Feature: domain Description: Doc Location: 47826-48189 bp Feature: domain Description: Doc Location: 4782 6-48189 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PhdYeFM_antitox (pfam02604), Doc (COG3654)

Seq: UQZR01000024.1 uncultured Clostridiales bacterium isolate UMGS792 genome assembly, contig: NODE_502_length_36641_cov_12.199431, whole genome shotgun sequence (36641 bp)
Overview 1 RT 1: 5606-10373 bp Neighborhood of RT #1 [5606, 10402] PDDEXK_4 RVT-Retrons PRK07105 Feature: gene Location: 5606-6763 bp Feature: domain Description: PDDEXK_4 Location: 5696-6182 bp Feature: domain Description: PDDEXK_4 Location: 5696-6182 bp Feature: gene Location: 6875-7384 bp Feature: gene Location: 7827-9029 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8133-8685 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 813 3 -8685 bp Feature: gene Location: 9426-9560 bp Feature: gene Location: 9557-10402 bp Feature: domain Description: PRK07105 Location: 9560-10373 bp Feature: domain Description: PRK07105 Location: 9560-103 73 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_4 (pfam14281), RVT-Retrons, PRK07105 (pyridoxamine kinase; Validated)