myRT

myRT report for GCA_900545965.1_UMGS828

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Seq: URBC01000002.1 uncultured Clostridiales bacterium isolate UMGS828 genome assembly, contig: NODE_76_length_138325_cov_14.698932, whole genome shotgun sequence (138325 bp)
Overview 1 RT 1: 134093-138295 bp Neighborhood of RT #1 [134093, 138295] SpoVG TrbL TrbL RVT-GII HNHc Feature: gene Location: 134093-134545 bp Feature: domain Description: SpoVG Location: 134165-134396 bp Feature: domain Description: SpoVG Location: 1 341 65-1 34396 bp Feature: gene Location: 134584-135447 bp Feature: domain Description: TrbL Location: 134605-134830 bp Feature: domain Description: TrbL Location: 1 34605-1 34830 bp Feature: domain Description: TrbL Location: 134881-135403 bp Feature: domain Description: TrbL Location: 1 34881 -1 35403 bp Feature: gene Location: 135713-137590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136040-136778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 36040-1 36778 bp Feature: domain Description: HNHc Note: nucleases Location: 137315-137477 bp Feature: domain Description: HNHc Note: nucleases Location: 1 3731 5-1 37477 bp Feature: gene Location: 138005-138295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoVG (pfam04026), TrbL (pfam04610), RVT-GII, HNHc (smart00507)

Seq: URBC01000003.1 uncultured Clostridiales bacterium isolate UMGS828 genome assembly, contig: NODE_78_length_137416_cov_16.588369, whole genome shotgun sequence (137416 bp)
Overview 1 RT 1: 6227-9834 bp Neighborhood of RT #1 [6227, 9836] RVT-DGRs Avd_like PHA00653 PHA00653 Feature: gene Location: 6227-6460 bp Feature: gene Location: 6511-6825 bp Feature: gene Location: 6897-7949 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7104-7782 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7104-7782 bp Feature: gene Location: 8284-8682 bp Feature: domain Description: Avd_like Location: 8341-8638 bp Feature: domain Description: Avd_like Location: 8341-8638 bp Feature: gene Location: 8736-9836 bp Feature: domain Description: PHA00653 Location: 8859-9315 bp Feature: domain Description: PHA00653 Location: 8859-9315 bp Feature: domain Description: PHA00653 Location: 9354-9834 bp Feature: domain Description: PHA00653 Location: 9354-9834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), PHA00653 (mtd;major tropism determinant)